Query: NC_010610:1649500 Lactobacillus fermentum IFO 3956, complete genome
Start: 1649500, End: 1672659, Length: 23160
Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_010610:1765000 | 1765000 | 1793448 | 28449 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 3079 | BLASTN svg | BLASTP svg |
NC_010610:1385066* | 1385066 | 1415731 | 30666 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2640 | BLASTN svg | BLASTP svg |
NC_010610:795975 | 795975 | 828854 | 32880 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2631 | BLASTN svg | BLASTP svg |
NC_010610:107500 | 107500 | 134852 | 27353 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2603 | BLASTN svg | BLASTP svg |
NC_010610:2013659 | 2013659 | 2051777 | 38119 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2593 | BLASTN svg | BLASTP svg |
NC_010610:1580483* | 1580483 | 1629244 | 48762 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2569 | BLASTN svg | BLASTP svg |
NC_010610:755000* | 755000 | 785599 | 30600 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2545 | BLASTN svg | BLASTP svg |
NC_010610:861194 | 861194 | 883923 | 22730 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2518 | BLASTN svg | BLASTP svg |
NC_010610:1178430 | 1178430 | 1228977 | 50548 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2383 | BLASTN svg | BLASTP svg |
NC_010610:269380* | 269380 | 295599 | 26220 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 1687 | BLASTN svg | BLASTP svg |
NC_008525:561000 | 561000 | 587099 | 26100 | Pediococcus pentosaceus ATCC 25745, complete genome | 0 | 928 | BLASTN svg | BLASTP svg |
NC_010080:1911932 | 1911932 | 1946633 | 34702 | Lactobacillus helveticus DPC 4571, complete genome | 3e-98 | 367 | BLASTN svg | BLASTP svg |
NC_010999:623489 | 623489 | 646097 | 22609 | Lactobacillus casei, complete genome | 3e-74 | 287 | BLASTN svg | BLASTP svg |
NC_008530:1454118* | 1454118 | 1489742 | 35625 | Lactobacillus gasseri ATCC 33323, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
NC_014106:244831 | 244831 | 265099 | 20269 | Lactobacillus crispatus ST1, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
NC_008497:32160 | 32160 | 50981 | 18822 | Lactobacillus brevis ATCC 367, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_010610:908452 | 908452 | 933099 | 24648 | Lactobacillus fermentum IFO 3956, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_015697:256000* | 256000 | 278366 | 22367 | Lactobacillus reuteri SD2112 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_008528:331260 | 331260 | 354633 | 23374 | Oenococcus oeni PSU-1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |