Query: NC_010610:1580483 Lactobacillus fermentum IFO 3956, complete genome
Start: 1580483, End: 1629244, Length: 48762
Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010610:1649500 | 1649500 | 1672659 | 23160 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2569 | BLASTN svg | BLASTP svg |
| NC_010610:1385066* | 1385066 | 1415731 | 30666 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2541 | BLASTN svg | BLASTP svg |
| NC_010610:795975 | 795975 | 828854 | 32880 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2535 | BLASTN svg | BLASTP svg |
| NC_010610:1765000 | 1765000 | 1793448 | 28449 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2520 | BLASTN svg | BLASTP svg |
| NC_010610:861194 | 861194 | 883923 | 22730 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2512 | BLASTN svg | BLASTP svg |
| NC_010610:107500 | 107500 | 134852 | 27353 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2470 | BLASTN svg | BLASTP svg |
| NC_010610:2013659 | 2013659 | 2051777 | 38119 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2448 | BLASTN svg | BLASTP svg |
| NC_010610:755000* | 755000 | 785599 | 30600 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2379 | BLASTN svg | BLASTP svg |
| NC_010610:1178430 | 1178430 | 1228977 | 50548 | Lactobacillus fermentum IFO 3956, complete genome | 0 | 2089 | BLASTN svg | BLASTP svg |
| NC_008497:32160 | 32160 | 50981 | 18822 | Lactobacillus brevis ATCC 367, complete genome | 0 | 1796 | BLASTN svg | BLASTP svg |
| NC_010610:269380* | 269380 | 295599 | 26220 | Lactobacillus fermentum IFO 3956, complete genome | 3e-91 | 345 | BLASTN svg | BLASTP svg |
| NC_008529:1634403 | 1634403 | 1658027 | 23625 | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete | 4e-81 | 311 | BLASTN svg | BLASTP svg |
| NC_008054:1649160 | 1649160 | 1689709 | 40550 | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete | 4e-81 | 311 | BLASTN svg | BLASTP svg |
| NC_014727:1877764 | 1877764 | 1912599 | 34836 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 3e-75 | 291 | BLASTN svg | BLASTP svg |
| NC_014727:1832144 | 1832144 | 1854599 | 22456 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 2e-70 | 276 | BLASTN svg | BLASTP svg |
| NC_008054:1617544 | 1617544 | 1643652 | 26109 | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete | 5e-68 | 268 | BLASTN svg | BLASTP svg |
| NC_008525:561000 | 561000 | 587099 | 26100 | Pediococcus pentosaceus ATCC 25745, complete genome | 1e-43 | 186 | BLASTN svg | BLASTP svg |
| NC_010999:623489 | 623489 | 646097 | 22609 | Lactobacillus casei, complete genome | 9e-39 | 170 | BLASTN svg | BLASTP svg |
| NC_010610:908452 | 908452 | 933099 | 24648 | Lactobacillus fermentum IFO 3956, complete genome | 2e-36 | 163 | BLASTN svg | BLASTP svg |
| NC_010999:2059738 | 2059738 | 2082247 | 22510 | Lactobacillus casei, complete genome | 1e-22 | 117 | BLASTN svg | BLASTP svg |
| NC_010080:1911932 | 1911932 | 1946633 | 34702 | Lactobacillus helveticus DPC 4571, complete genome | 3e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_014106:244831 | 244831 | 265099 | 20269 | Lactobacillus crispatus ST1, complete genome | 1e-19 | 107 | BLASTN svg | BLASTP svg |
| NC_004567:1066710 | 1066710 | 1086272 | 19563 | Lactobacillus plantarum WCFS1, complete genome | 7e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_007929:1290568* | 1290568 | 1314073 | 23506 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 3e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015420:35384 | 35384 | 61999 | 26616 | Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete | 1e-13 | 87.7 | BLASTN svg | BLASTP svg |
| NC_013961:3083816 | 3083816 | 3106099 | 22284 | Erwinia amylovora, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_008526:343445 | 343445 | 367272 | 23828 | Lactobacillus casei ATCC 334, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_004567:1089231 | 1089231 | 1114901 | 25671 | Lactobacillus plantarum WCFS1, complete genome | 1e-10 | 77.8 | BLASTN svg | BLASTP svg |
| NC_012214:745302 | 745302 | 766959 | 21658 | Erwinia pyrifoliae Ep1/96, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010694:715500 | 715500 | 738871 | 23372 | Erwinia tasmaniensis, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007645:6013242* | 6013242 | 6037210 | 23969 | Hahella chejuensis KCTC 2396, complete genome | 6e-06 | 61.9 | BLASTN svg | BLASTP svg |