Query: NC_010519:1684901 Haemophilus somnus 2336 chromosome, complete genome
Start: 1684901, End: 1713311, Length: 28411
Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008309:1200245* | 1200245 | 1218599 | 18355 | Haemophilus somnus 129PT, complete genome | 2e-69 | 272 | BLASTN svg | BLASTP svg |
| NC_002663:62500 | 62500 | 86531 | 24032 | Pasteurella multocida subsp. multocida str. Pm70, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
| NC_009053:1081651 | 1081651 | 1111811 | 30161 | Actinobacillus pleuropneumoniae L20, complete genome | 2e-32 | 149 | BLASTN svg | BLASTP svg |
| NC_013416:939668* | 939668 | 962707 | 23040 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
| NC_008309:190550 | 190550 | 222599 | 32050 | Haemophilus somnus 129PT, complete genome | 7e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_008309:1155218 | 1155218 | 1178249 | 23032 | Haemophilus somnus 129PT, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_007292:113396 | 113396 | 135334 | 21939 | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome | 3e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_008309:1289370 | 1289370 | 1314906 | 25537 | Haemophilus somnus 129PT, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
| NC_020075:114790* | 114790 | 134617 | 19828 | Candidatus Blochmannia chromaiodes str. 640, complete genome | 6e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_008309:385592 | 385592 | 409099 | 23508 | Haemophilus somnus 129PT, complete genome | 6e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_008309:1827809 | 1827809 | 1851140 | 23332 | Haemophilus somnus 129PT, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_002528:404545* | 404545 | 428227 | 23683 | Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_008309:1851189* | 1851189 | 1879447 | 28259 | Haemophilus somnus 129PT, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_005061:96536* | 96536 | 142012 | 45477 | Candidatus Blochmannia floridanus, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014909:86000* | 86000 | 121501 | 35502 | Candidatus Blochmannia vafer str. BVAF chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_013716:4885776* | 4885776 | 4905627 | 19852 | Citrobacter rodentium ICC168, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_002942:2943206 | 2943206 | 2964455 | 21250 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_004545:392685* | 392685 | 414845 | 22161 | Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_006368:3028286 | 3028286 | 3054926 | 26641 | Legionella pneumophila str. Paris, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008309:502983* | 502983 | 529268 | 26286 | Haemophilus somnus 129PT, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_012880:3915500* | 3915500 | 3938741 | 23242 | Dickeya dadantii Ech703, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010939:896500* | 896500 | 921599 | 25100 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |