Query: NC_010162:10764788 Sorangium cellulosum 'So ce 56', complete genome
Start: 10764788, End: 10789550, Length: 24763
Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria
General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008786:18688 | 18688 | 42623 | 23936 | Verminephrobacter eiseniae EF01-2, complete genome | 3e-74 | 287 | BLASTN svg | BLASTP svg |
NC_015138:272500 | 272500 | 295660 | 23161 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 1e-67 | 266 | BLASTN svg | BLASTP svg |
NC_013851:1866523* | 1866523 | 1888928 | 22406 | Allochromatium vinosum DSM 180 chromosome, complete genome | 5e-48 | 200 | BLASTN svg | BLASTP svg |
NC_004463:1520303* | 1520303 | 1548020 | 27718 | Bradyrhizobium japonicum USDA 110, complete genome | 3e-43 | 184 | BLASTN svg | BLASTP svg |
NC_003047:3202125* | 3202125 | 3229127 | 27003 | Sinorhizobium meliloti 1021, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_014666:3629696 | 3629696 | 3649099 | 19404 | Frankia sp. EuI1c chromosome, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_010162:9207000* | 9207000 | 9233168 | 26169 | Sorangium cellulosum 'So ce 56', complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_008702:4064470 | 4064470 | 4092113 | 27644 | Azoarcus sp. BH72, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_002678:5020000 | 5020000 | 5038411 | 18412 | Mesorhizobium loti MAFF303099, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_004347:1038253* | 1038253 | 1070537 | 32285 | Shewanella oneidensis MR-1, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_007777:135222* | 135222 | 165908 | 30687 | Frankia sp. CcI3, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_008321:977500 | 977500 | 999795 | 22296 | Shewanella sp. MR-4, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_008322:3758500 | 3758500 | 3780501 | 22002 | Shewanella sp. MR-7, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_009831:4539952 | 4539952 | 4580028 | 40077 | Shewanella sediminis HAW-EB3, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_010162:8528116 | 8528116 | 8553297 | 25182 | Sorangium cellulosum 'So ce 56', complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010162:12652197 | 12652197 | 12672099 | 19903 | Sorangium cellulosum 'So ce 56', complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_012489:652319 | 652319 | 690388 | 38070 | Gemmatimonas aurantiaca T-27, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014815:5888934* | 5888934 | 5908005 | 19072 | Micromonospora sp. L5 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010162:8760128 | 8760128 | 8781099 | 20972 | Sorangium cellulosum 'So ce 56', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010162:8585856* | 8585856 | 8604099 | 18244 | Sorangium cellulosum 'So ce 56', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010162:7824878 | 7824878 | 7851920 | 27043 | Sorangium cellulosum 'So ce 56', complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010506:4951500 | 4951500 | 4973150 | 21651 | Shewanella woodyi ATCC 51908, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |