Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:8585856 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
85858568586341486hypothetical proteinBLASTP
858666985877571089hypothetical proteinBLASTP
85881838588512330hypothetical protein
85887198589492774hypothetical proteinBLASTP
85894898590031543hypothetical proteinBLASTP
85902998590862564hypothetical proteinBLASTP
859096085920601101hypothetical proteinBLASTP
859225985938121554putative secreted proteinQuickGO ontologyBLASTP
859385085954901641hypothetical proteinBLASTP
859551185966141104hypothetical proteinBLASTP
859683585978871053ECF family RNA polymerase sigma factorQuickGO ontologyBLASTP
85983958598913519leucine-rich repeat-containing extensinQuickGO ontologyBLASTP
85991258599463339transposaseQuickGO ontologyBLASTP
85994578599879423transposaseQuickGO ontologyBLASTP
859987686015401665transposaseQuickGO ontologyBLASTP
86017388602307570hypothetical proteinBLASTP
86023358603291957ATPase with chaperone activityQuickGO ontologyBLASTP