Pre_GI: BLASTN Hits

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Query: NC_009512:4408325 Pseudomonas putida F1, complete genome

Start: 4408325, End: 4431842, Length: 23518

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010170:23748522374852241026935418Bordetella petrii, complete genome2e-96361BLASTN svgBLASTP svg
NC_010804:67108167108170545734377Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-72280BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-53218BLASTN svgBLASTP svg
NC_009767:47550004755000477677321774Roseiflexus castenholzii DSM 13941, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007510:759905*75990579524835344Burkholderia sp. 383 chromosome 1, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_004129:22348512234851226009925249Pseudomonas fluorescens Pf-5, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006348:2372945*2372945241139038446Burkholderia mallei ATCC 23344 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_006350:3329477*3329477336792338447Burkholderia pseudomallei K96243 chromosome 1, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_007434:3588081*3588081362652838448Burkholderia pseudomallei 1710b chromosome I, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008785:51650051650055172735228Burkholderia mallei SAVP1 chromosome II, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008836:1072721*1072721111116638446Burkholderia mallei NCTC 10229 chromosome II, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_009074:3163362*3163362320181038449Burkholderia pseudomallei 668 chromosome I, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_009076:3179662*3179662321810738446Burkholderia pseudomallei 1106a chromosome I, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_009080:2123987*2123987216243238446Burkholderia mallei NCTC 10247 chromosome II, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008060:306170*30617034178635617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_008542:855347*85534788974734401Burkholderia cenocepacia HI2424 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_010508:809974*80997484542135448Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015947:56812456812459380225679Burkholderia sp. JV3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009142:28015172801517283231830802Saccharopolyspora erythraea NRRL 2338, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015577:12899751289975132020230228Treponema azotonutricium ZAS-9 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014391:26513152651315269455543241Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009142:45718894571889461144339555Saccharopolyspora erythraea NRRL 2338, complete genome3e-0661.9BLASTN svgBLASTP svg