Query: NC_009512:4408325 Pseudomonas putida F1, complete genome
Start: 4408325, End: 4431842, Length: 23518
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010170:2374852 | 2374852 | 2410269 | 35418 | Bordetella petrii, complete genome | 2e-96 | 361 | BLASTN svg | BLASTP svg |
NC_010804:671081 | 671081 | 705457 | 34377 | Burkholderia multivorans ATCC 17616 chromosome 1, complete | 6e-72 | 280 | BLASTN svg | BLASTP svg |
NC_004578:1153738 | 1153738 | 1172688 | 18951 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 2e-53 | 218 | BLASTN svg | BLASTP svg |
NC_009767:4755000 | 4755000 | 4776773 | 21774 | Roseiflexus castenholzii DSM 13941, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007510:759905* | 759905 | 795248 | 35344 | Burkholderia sp. 383 chromosome 1, complete sequence | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_004129:2234851 | 2234851 | 2260099 | 25249 | Pseudomonas fluorescens Pf-5, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_007492:4563981 | 4563981 | 4589496 | 25516 | Pseudomonas fluorescens PfO-1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_006348:2372945* | 2372945 | 2411390 | 38446 | Burkholderia mallei ATCC 23344 chromosome 1, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_006350:3329477* | 3329477 | 3367923 | 38447 | Burkholderia pseudomallei K96243 chromosome 1, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007434:3588081* | 3588081 | 3626528 | 38448 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008785:516500 | 516500 | 551727 | 35228 | Burkholderia mallei SAVP1 chromosome II, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008836:1072721* | 1072721 | 1111166 | 38446 | Burkholderia mallei NCTC 10229 chromosome II, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009074:3163362* | 3163362 | 3201810 | 38449 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009076:3179662* | 3179662 | 3218107 | 38446 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009080:2123987* | 2123987 | 2162432 | 38446 | Burkholderia mallei NCTC 10247 chromosome II, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008060:306170* | 306170 | 341786 | 35617 | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008542:855347* | 855347 | 889747 | 34401 | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010508:809974* | 809974 | 845421 | 35448 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012560:1564500 | 1564500 | 1593800 | 29301 | Azotobacter vinelandii DJ, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021150:1564229 | 1564229 | 1595034 | 30806 | Azotobacter vinelandii CA6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015947:568124 | 568124 | 593802 | 25679 | Burkholderia sp. JV3 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015957:5182460 | 5182460 | 5221284 | 38825 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009142:2801517 | 2801517 | 2832318 | 30802 | Saccharopolyspora erythraea NRRL 2338, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015577:1289975 | 1289975 | 1320202 | 30228 | Treponema azotonutricium ZAS-9 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014391:2651315 | 2651315 | 2694555 | 43241 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009142:4571889 | 4571889 | 4611443 | 39555 | Saccharopolyspora erythraea NRRL 2338, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |