Pre_GI: BLASTN Hits

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Query: NC_009495:1821938 Clostridium botulinum A str. ATCC 3502 chromosome, complete genome

Start: 1821938, End: 1839631, Length: 17694

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well-studied Hall strain that produces type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:16816391681639170433322695Clostridium botulinum A2 str. Kyoto, complete genome01360BLASTN svgBLASTP svg
NC_010516:2676746*2676746271365836913Clostridium botulinum B1 str. Okra, complete genome9e-83315BLASTN svgBLASTP svg
NC_010379:73718737189609922382Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_020291:62740306274030629482420795Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014328:11084791108479112609917621Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010418:70000700009209922100Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete8e-0660BLASTN svgBLASTP svg