Pre_GI: BLASTN Hits

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Query: NC_009012:574145 Clostridium thermocellum ATCC 27405, complete genome

Start: 574145, End: 599440, Length: 25296

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014652:62843562843565489426460Caldicellulosiruptor hydrothermalis 108 chromosome, complete1e-20109BLASTN svgBLASTP svg
NC_020134:58684058684060466017821Clostridium stercorarium subsp. stercorarium DSM 8532, complete2e-1695.6BLASTN svgBLASTP svg
NC_018664:16633241663324168566922346Clostridium acidurici 9a chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014721:43450143450145738422884Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_010718:1454087*1454087147302118935Natranaerobius thermophilus JW/NM-WN-LF, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020291:49448354944835500759962765Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004557:18269771826977184565818682Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014377:1089894*1089894110909919206Thermosediminibacter oceani DSM 16646 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:4903981*4903981494131537335Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014328:1135854*1135854115915023297Clostridium ljungdahlii ATCC 49587 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010674:85839785839787856720171Clostridium botulinum B str. Eklund 17B, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014377:10600001060000108277422775Thermosediminibacter oceani DSM 16646 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010723:83387083387085686522996Clostridium botulinum E3 str. Alaska E43, complete genome3e-0661.9BLASTN svgBLASTP svg