Query: NC_008710:819389 Borrelia turicatae 91E135, complete genome
Start: 819389, End: 845561, Length: 26173
Host Lineage: Borrelia turicatae; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria
General Information: This strain was isolated in the USA from the soft tick Ornithodoros turicatae. Borrelia turicatae is the causative agent of tick-borne relapsing fever in the southwestern USA. Ticks become infected with Borrelia while feeding on an infected mammal, usually a rodent or squirrel. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the spirochete into a mammalian host through its infectious saliva. Relapsing fever is characterized by period of chills, fever, headache, and malaise, followed by an asymptomatic, followed by another episode of symptoms. The cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_012563:4004709* | 4004709 | 4037273 | 32565 | Clostridium botulinum A2 str. Kyoto, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010516:3807780* | 3807780 | 3840355 | 32576 | Clostridium botulinum B1 str. Okra, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_019815:782987* | 782987 | 806053 | 23067 | Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008011:213386* | 213386 | 249495 | 36110 | Lawsonia intracellularis PHE/MN1-00, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015687:3326461* | 3326461 | 3351268 | 24808 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014393:4541000* | 4541000 | 4566440 | 25441 | Clostridium cellulovorans 743B chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011999:2023248* | 2023248 | 2048774 | 25527 | Macrococcus caseolyticus JCSC5402, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_003030:3324834* | 3324834 | 3349642 | 24809 | Clostridium acetobutylicum ATCC 824, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_018664:2459994* | 2459994 | 2486099 | 26106 | Clostridium acidurici 9a chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008593:153014* | 153014 | 171753 | 18740 | Clostridium novyi NT, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_005043:1143557* | 1143557 | 1166335 | 22779 | Chlamydophila pneumoniae TW-183, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_002179:904518* | 904518 | 923559 | 19042 | Chlamydophila pneumoniae AR39, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_000922:1147855* | 1147855 | 1168901 | 21047 | Chlamydophila pneumoniae CWL029, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_019814:320260* | 320260 | 340150 | 19891 | Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015978:412856* | 412856 | 440634 | 27779 | Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_005042:830000* | 830000 | 852111 | 22112 | Prochlorococcus marinus subsp. marinus str. CCMP1375, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015760:8914* | 8914 | 27210 | 18297 | Streptococcus salivarius CCHSS3, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_005125:760721 | 760721 | 804748 | 44028 | Gloeobacter violaceus PCC 7421, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |