Query: NC_008595:661507 Mycobacterium avium 104, complete genome
Start: 661507, End: 684187, Length: 22681
Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008595:2687245 | 2687245 | 2728149 | 40905 | Mycobacterium avium 104, complete genome | 0 | 2648 | BLASTN svg | BLASTP svg |
NC_008595:1413354 | 1413354 | 1443794 | 30441 | Mycobacterium avium 104, complete genome | 0 | 2646 | BLASTN svg | BLASTP svg |
NC_008595:5234467 | 5234467 | 5253142 | 18676 | Mycobacterium avium 104, complete genome | 0 | 2640 | BLASTN svg | BLASTP svg |
NC_008595:1176658 | 1176658 | 1196867 | 20210 | Mycobacterium avium 104, complete genome | 0 | 2605 | BLASTN svg | BLASTP svg |
NC_008595:2252830 | 2252830 | 2273720 | 20891 | Mycobacterium avium 104, complete genome | 0 | 906 | BLASTN svg | BLASTP svg |
NC_008146:2744612 | 2744612 | 2774511 | 29900 | Mycobacterium sp. MCS, complete genome | 4e-153 | 549 | BLASTN svg | BLASTP svg |
NC_008705:2763131 | 2763131 | 2792399 | 29269 | Mycobacterium sp. KMS, complete genome | 4e-153 | 549 | BLASTN svg | BLASTP svg |
NC_008705:1022252* | 1022252 | 1048286 | 26035 | Mycobacterium sp. KMS, complete genome | 2e-152 | 547 | BLASTN svg | BLASTP svg |
NC_008146:1016446* | 1016446 | 1044593 | 28148 | Mycobacterium sp. MCS, complete genome | 2e-152 | 547 | BLASTN svg | BLASTP svg |
NC_008705:1557711 | 1557711 | 1610599 | 52889 | Mycobacterium sp. KMS, complete genome | 7e-152 | 545 | BLASTN svg | BLASTP svg |
NC_008595:5168941 | 5168941 | 5213599 | 44659 | Mycobacterium avium 104, complete genome | 3e-151 | 543 | BLASTN svg | BLASTP svg |
NC_008595:1869284 | 1869284 | 1891757 | 22474 | Mycobacterium avium 104, complete genome | 5e-85 | 323 | BLASTN svg | BLASTP svg |
NC_012207:831030 | 831030 | 853609 | 22580 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_002945:831029 | 831029 | 853656 | 22628 | Mycobacterium bovis AF2122/97, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_008726:6335961 | 6335961 | 6377424 | 41464 | Mycobacterium vanbaalenii PYR-1, complete genome | 2e-81 | 311 | BLASTN svg | BLASTP svg |
NC_008146:3349415 | 3349415 | 3381015 | 31601 | Mycobacterium sp. MCS, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_008705:3377697 | 3377697 | 3409297 | 31601 | Mycobacterium sp. KMS, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_009077:3323291 | 3323291 | 3354891 | 31601 | Mycobacterium sp. JLS, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_014814:4326500 | 4326500 | 4351099 | 24600 | Mycobacterium sp. Spyr1 chromosome, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_008595:2215244 | 2215244 | 2249735 | 34492 | Mycobacterium avium 104, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_002677:2642860 | 2642860 | 2682483 | 39624 | Mycobacterium leprae TN, complete genome | 9e-34 | 153 | BLASTN svg | BLASTP svg |
NC_012803:1519138 | 1519138 | 1537823 | 18686 | Micrococcus luteus NCTC 2665, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_014168:56728* | 56728 | 81463 | 24736 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_018581:759932 | 759932 | 801242 | 41311 | Gordonia sp. KTR9 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_014215:2259290 | 2259290 | 2283205 | 23916 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014215:142500 | 142500 | 167760 | 25261 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010545:1904162 | 1904162 | 1922453 | 18292 | Corynebacterium urealyticum DSM 7109, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015957:10505870 | 10505870 | 10528082 | 22213 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015671:1678088* | 1678088 | 1702235 | 24148 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_008278:744777 | 744777 | 763165 | 18389 | Frankia alni ACN14a, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013595:8338619 | 8338619 | 8364105 | 25487 | Streptosporangium roseum DSM 43021, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013757:1544348* | 1544348 | 1582199 | 37852 | Geodermatophilus obscurus DSM 43160, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015848:2381148 | 2381148 | 2404582 | 23435 | Mycobacterium canettii CIPT 140010059, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_019673:2635585* | 2635585 | 2659537 | 23953 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008344:1899317* | 1899317 | 1925099 | 25783 | Nitrosomonas eutropha C91, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009142:5519208 | 5519208 | 5548917 | 29710 | Saccharopolyspora erythraea NRRL 2338, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010612:835648 | 835648 | 862999 | 27352 | Mycobacterium marinum M, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013209:2782500* | 2782500 | 2805750 | 23251 | Acetobacter pasteurianus IFO 3283-01, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015848:483500 | 483500 | 509988 | 26489 | Mycobacterium canettii CIPT 140010059, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_016027:1647110 | 1647110 | 1695724 | 48615 | Gluconacetobacter xylinus NBRC 3288, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019950:481881 | 481881 | 506007 | 24127 | Mycobacterium canettii CIPT 140060008 complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004757:427483* | 427483 | 479579 | 52097 | Nitrosomonas europaea ATCC 19718, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |