Pre_GI: BLASTN Hits

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Query: NC_008278:2732890 Frankia alni ACN14a, complete genome

Start: 2732890, End: 2785591, Length: 52702

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome06673BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome0674BLASTN svgBLASTP svg
NC_009921:53315655331565535374522181Frankia sp. EAN1pec, complete genome0658BLASTN svgBLASTP svg
NC_015656:14695011469501148804818548Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:1592021*1592021161171419694Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:16183291618329163809919771Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:16534501653450168062227173Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:1947810*1947810196775019941Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:27957842795784281882923046Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome4e-115424BLASTN svgBLASTP svg
NC_015656:381554*38155440733625783Frankia symbiont of Datisca glomerata chromosome, complete genome2e-110408BLASTN svgBLASTP svg
NC_007777:4892150*4892150493295540806Frankia sp. CcI3, complete genome3e-91345BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome1e-78303BLASTN svgBLASTP svg
NC_009921:55080005508000553009922100Frankia sp. EAN1pec, complete genome4e-78301BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome6e-77297BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome2e-64256BLASTN svgBLASTP svg
NC_007777:49543064954306497563821333Frankia sp. CcI3, complete genome2e-58236BLASTN svgBLASTP svg
NC_008278:2813362*2813362285431440953Frankia alni ACN14a, complete genome3e-32149BLASTN svgBLASTP svg
NC_008699:29167522916752293906622315Nocardioides sp. JS614, complete genome1e-31147BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence5e-19105BLASTN svgBLASTP svg
NC_008268:2313583*2313583234448830906Rhodococcus sp. RHA1, complete genome5e-19105BLASTN svgBLASTP svg
NC_007777:28410002841000290393262933Frankia sp. CcI3, complete genome5e-19105BLASTN svgBLASTP svg
NC_012522:2031786*2031786206157229787Rhodococcus opacus B4, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_009921:55319725531972555201920048Frankia sp. EAN1pec, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_009921:34557833455783347739221610Frankia sp. EAN1pec, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_014830:12522491252249128855336305Intrasporangium calvum DSM 43043 chromosome, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_013595:71957647195764721894723184Streptosporangium roseum DSM 43021, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_008726:92589592589594809922205Mycobacterium vanbaalenii PYR-1, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_021150:2546000*2546000257243726438Azotobacter vinelandii CA6, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_012560:2546000*2546000257242526426Azotobacter vinelandii DJ, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_006361:36153223615322363714921828Nocardia farcinica IFM 10152, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_009142:55192085519208554891729710Saccharopolyspora erythraea NRRL 2338, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_010816:62184962184964504823200Bifidobacterium longum DJO10A, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013093:54194585419458545295833501Actinosynnema mirum DSM 43827, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015052:1569255*1569255159297923725Bifidobacterium longum subsp. infantis 157F, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015067:2282000*2282000230417622177Bifidobacterium longum subsp. longum JCM 1217, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015067:45962645962649282633201Bifidobacterium longum subsp. longum JCM 1217, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015711:6522808*6522808656473541928Myxococcus fulvus HW-1 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_003888:13953191395319141826922951Streptomyces coelicolor A3(2), complete genome2e-0973.8BLASTN svgBLASTP svg
NC_009921:8215996*8215996825909943104Frankia sp. EAN1pec, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_018750:68696756869675689368924015Streptomyces venezuelae ATCC 10712, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_012490:2006716*2006716203398627271Rhodococcus erythropolis PR4, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007777:11704061170406118994019535Frankia sp. CcI3, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_013722:1785692*1785692183919253501Xanthomonas albilineans, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014623:50299325029932508446054529Stigmatella aurantiaca DW4/3-1 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_018750:82105008210500823849928000Streptomyces venezuelae ATCC 10712, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_020126:4517133*4517133455758540453Myxococcus stipitatus DSM 14675, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_021177:21398382139838216484225005Streptomyces fulvissimus DSM 40593, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008268:57456205745620576709921480Rhodococcus sp. RHA1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015957:33421693342169336097518807Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_015564:48499448499451314828155Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014623:5942918*5942918597391931002Stigmatella aurantiaca DW4/3-1 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence6e-0661.9BLASTN svgBLASTP svg