Pre_GI: BLASTN Hits

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Query: NC_008253:2965573 Escherichia coli 536, complete genome

Start: 2965573, End: 2989538, Length: 23966

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007946:31255773125577314932023744Escherichia coli UTI89, complete genome040610BLASTN svgBLASTP svg
NC_010498:3023442*3023442304751524074Escherichia coli SMS-3-5, complete genome029170BLASTN svgBLASTP svg
NC_007613:2699500*2699500272161822119Shigella boydii Sb227, complete genome024680BLASTN svgBLASTP svg
NC_009648:34760003476000349829422295Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome01350BLASTN svgBLASTP svg
NC_008563:31192843119284314330124018Escherichia coli APEC O1, complete genome9e-133482BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome9e-28133BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome2e-25125BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome9e-25123BLASTN svgBLASTP svg
NC_009348:27387422738742276172922988Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-19105BLASTN svgBLASTP svg
NC_007712:33820003382000340824226243Sodalis glossinidius str. 'morsitans', complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007348:20119572011957203523223276Ralstonia eutropha JMP134 chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010694:30554033055403307880623404Erwinia tasmaniensis, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012962:35680463568046362047652431Photorhabdus asymbiotica, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-1281.8BLASTN svgBLASTP svg
NC_010501:35757263575726360509929374Pseudomonas putida W619, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004459:1794540*1794540182011925580Vibrio vulnificus CMCP6 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010552:59215459215461849626343Burkholderia ambifaria MC40-6 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg