Pre_GI: BLASTN Hits

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Query: NC_008146:20047 Mycobacterium sp. MCS, complete genome

Start: 20047, End: 53174, Length: 33128

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome027820BLASTN svgBLASTP svg
NC_013441:27877*278775974431868Gordonia bronchialis DSM 43247, complete genome3e-99371BLASTN svgBLASTP svg
NC_018581:32092*320925119319102Gordonia sp. KTR9 chromosome, complete genome1e-89339BLASTN svgBLASTP svg
NC_004369:41236*412366188820653Corynebacterium efficiens YS-314, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_015514:33972*339726268928718Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010612:68154468154470456323020Mycobacterium marinum M, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008541:10423221042322108277040449Arthrobacter sp. FB24 chromosome 1, complete sequence2e-1489.7BLASTN svgBLASTP svg
NC_014973:3414459*3414459344509930641Geobacter sp. M18 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_015161:1556766*1556766159609939334Deinococcus proteolyticus MRP chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-1385.7BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008595:18445001844500186548520986Mycobacterium avium 104, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_002935:48687*486876982821142Corynebacterium diphtheriae NCTC 13129, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_003155:5302280*5302280532158519306Streptomyces avermitilis MA-4680, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_007298:1418500*1418500146207243573Dechloromonas aromatica RCB, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_012483:18135211813521183987026350Acidobacterium capsulatum ATCC 51196, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013169:1410384*1410384143716826785Kytococcus sedentarius DSM 20547, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013757:21245212454675925515Geodermatophilus obscurus DSM 43160, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018681:53781975378197541859940403Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010572:12937861293786131684623061Streptomyces griseus subsp. griseus NBRC 13350, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015671:20114622011462203421622755Cellvibrio gilvus ATCC 13127 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_018750:69506956950695697113120437Streptomyces venezuelae ATCC 10712, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_021177:71596547159654718278823135Streptomyces fulvissimus DSM 40593, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013510:3032114*3032114305663624523Thermomonospora curvata DSM 43183, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015677:39657163965716398829822583Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg