Query: NC_008146:20047 Mycobacterium sp. MCS, complete genome
Start: 20047, End: 53174, Length: 33128
Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008705:27434* | 27434 | 57217 | 29784 | Mycobacterium sp. KMS, complete genome | 0 | 27820 | BLASTN svg | BLASTP svg |
NC_013441:27877* | 27877 | 59744 | 31868 | Gordonia bronchialis DSM 43247, complete genome | 3e-99 | 371 | BLASTN svg | BLASTP svg |
NC_018581:32092* | 32092 | 51193 | 19102 | Gordonia sp. KTR9 chromosome, complete genome | 1e-89 | 339 | BLASTN svg | BLASTP svg |
NC_004369:41236* | 41236 | 61888 | 20653 | Corynebacterium efficiens YS-314, complete genome | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_015514:33972* | 33972 | 62689 | 28718 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_010612:681544 | 681544 | 704563 | 23020 | Mycobacterium marinum M, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008541:1042322 | 1042322 | 1082770 | 40449 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014973:3414459* | 3414459 | 3445099 | 30641 | Geobacter sp. M18 chromosome, complete genome | 7e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015161:1556766* | 1556766 | 1596099 | 39334 | Deinococcus proteolyticus MRP chromosome, complete genome | 7e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014215:492855 | 492855 | 513399 | 20545 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014151:30488* | 30488 | 60099 | 29612 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008595:1844500 | 1844500 | 1865485 | 20986 | Mycobacterium avium 104, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_006087:28490* | 28490 | 75671 | 47182 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_002935:48687* | 48687 | 69828 | 21142 | Corynebacterium diphtheriae NCTC 13129, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_012590:37697* | 37697 | 73579 | 35883 | Corynebacterium aurimucosum ATCC 700975, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_011662:1 | 1 | 42052 | 42052 | Thauera sp. MZ1T, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_003155:5302280* | 5302280 | 5321585 | 19306 | Streptomyces avermitilis MA-4680, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007298:1418500* | 1418500 | 1462072 | 43573 | Dechloromonas aromatica RCB, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012483:1813521 | 1813521 | 1839870 | 26350 | Acidobacterium capsulatum ATCC 51196, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013716:5141269* | 5141269 | 5170088 | 28820 | Citrobacter rodentium ICC168, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011750:5045927* | 5045927 | 5068277 | 22351 | Escherichia coli IAI39 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_002935:1237585* | 1237585 | 1311599 | 74015 | Corynebacterium diphtheriae NCTC 13129, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013169:1410384* | 1410384 | 1437168 | 26785 | Kytococcus sedentarius DSM 20547, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_013757:21245 | 21245 | 46759 | 25515 | Geodermatophilus obscurus DSM 43160, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_018681:5378197 | 5378197 | 5418599 | 40403 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015859:1631573 | 1631573 | 1659253 | 27681 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_003155:2211087 | 2211087 | 2230440 | 19354 | Streptomyces avermitilis MA-4680, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010572:1293786 | 1293786 | 1316846 | 23061 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015656:3232809* | 3232809 | 3251973 | 19165 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015671:2011462 | 2011462 | 2034216 | 22755 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015957:2678544* | 2678544 | 2711627 | 33084 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018750:6950695 | 6950695 | 6971131 | 20437 | Streptomyces venezuelae ATCC 10712, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_021177:7159654 | 7159654 | 7182788 | 23135 | Streptomyces fulvissimus DSM 40593, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013510:3032114* | 3032114 | 3056636 | 24523 | Thermomonospora curvata DSM 43183, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015677:3965716 | 3965716 | 3988298 | 22583 | Ramlibacter tataouinensis TTB310 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |