Query: NC_006512:2789098 Idiomarina loihiensis L2TR, complete genome
Start: 2789098, End: 2819901, Length: 30804
Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_009052:5089963 | 5089963 | 5110248 | 20286 | Shewanella baltica OS155, complete genome | 5e-36 | 161 | BLASTN svg | BLASTP svg |
NC_007384:4095016 | 4095016 | 4122290 | 27275 | Shigella sonnei Ss046, complete genome | 3e-25 | 125 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 7e-23 | 117 | BLASTN svg | BLASTP svg |
NC_011751:4373961 | 4373961 | 4400537 | 26577 | Escherichia coli UMN026 chromosome, complete genome | 2e-20 | 109 | BLASTN svg | BLASTP svg |
NC_010498:4166903 | 4166903 | 4193471 | 26569 | Escherichia coli SMS-3-5, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
NC_011750:4490573 | 4490573 | 4517142 | 26570 | Escherichia coli IAI39 chromosome, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_007481:3167434* | 3167434 | 3192952 | 25519 | Pseudoalteromonas haloplanktis TAC125 chromosome I, complete | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010995:4525119 | 4525119 | 4558887 | 33769 | Cellvibrio japonicus Ueda107, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015222:386000* | 386000 | 407599 | 21600 | Nitrosomonas sp. AL212 chromosome, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014328:4387303* | 4387303 | 4458527 | 71225 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004545:15650* | 15650 | 69599 | 53950 | Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |