Pre_GI: BLASTN Hits

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Query: NC_005140:444353 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 444353, End: 465186, Length: 20834

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004460:17180881718088173988521798Vibrio vulnificus CMCP6 chromosome II, complete sequence038440BLASTN svgBLASTP svg
NC_011186:81982881982884300723180Vibrio fischeri MJ11 chromosome II, complete sequence5e-20107BLASTN svgBLASTP svg
NC_006841:75000075000077007720078Vibrio fischeri ES114 chromosome II, complete sequence5e-20107BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome7e-19103BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-1489.7BLASTN svgBLASTP svg
NC_014394:80873480873483220323470Gallionella capsiferriformans ES-2 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome4e-1487.7BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome4e-1487.7BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome4e-1487.7BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012997:81755381755384234124789Teredinibacter turnerae T7901, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015437:76757276757279017322602Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009792:71495371495374483829886Citrobacter koseri ATCC BAA-895, complete genome6e-1073.8BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006371:1997954*1997954202569227739Photobacterium profundum SS9 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_004347:31972193197219322182524607Shewanella oneidensis MR-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008700:27883632788363281549227130Shewanella amazonensis SB2B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015638:10297211029721106817938459Lacinutrix sp. 5H-3-7-4 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006274:48146014814601483509920499Bacillus cereus E33L, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005140:96026196026198150721247Vibrio vulnificus YJ016 chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015064:1722776*1722776174138218607Acidobacterium sp. MP5ACTX9 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015638:62454624548122418771Lacinutrix sp. 5H-3-7-4 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014973:26936722693672271365719986Geobacter sp. M18 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-0661.9BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_004603:1961432*1961432198465023219Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete2e-0661.9BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0560BLASTN svgBLASTP svg
NC_007298:2947200*2947200297064623447Dechloromonas aromatica RCB, complete genome1e-0560BLASTN svgBLASTP svg