Pre_GI: BLASTN Hits

Some Help

Query: NC_004567:1066710 Lactobacillus plantarum WCFS1, complete genome

Start: 1066710, End: 1086272, Length: 19563

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012984:10747211074721110359928879Lactobacillus plantarum JDM1, complete genome08274BLASTN svgBLASTP svg
NC_004567:10892311089231111490125671Lactobacillus plantarum WCFS1, complete genome3e-39170BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome2e-19105BLASTN svgBLASTP svg
NC_006300:60051660051663151030995Mannheimia succiniciproducens MBEL55E, complete genome7e-19103BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome3e-18101BLASTN svgBLASTP svg
NC_013198:2088780*2088780211935230573Lactobacillus rhamnosus GG, complete genome3e-18101BLASTN svgBLASTP svg
NC_018704:24179022417902243940821507Amphibacillus xylanus NBRC 15112, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008525:60698660698663027323288Pediococcus pentosaceus ATCC 25745, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012704:69637469637471709920726Corynebacterium kroppenstedtii DSM 44385, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007929:16372611637261165608018820Lactobacillus salivarius subsp. salivarius UCC118, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014011:1760793*1760793179428233490Aminobacterium colombiense DSM 12261 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010634:44637274463727449917835452Yersinia pseudotuberculosis PB1/+, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004663:24377602437760248127943520Bacteroides thetaiotaomicron VPI-5482, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014219:2253023*2253023227461221590Bacillus selenitireducens MLS10 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_018515:4334240*4334240437632942090Desulfosporosinus meridiei DSM 13257 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009922:2766397*2766397278959923203Alkaliphilus oremlandii OhILAs, complete genome9e-0660BLASTN svgBLASTP svg