Query: NC_004567:1066710 Lactobacillus plantarum WCFS1, complete genome
Start: 1066710, End: 1086272, Length: 19563
Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: Originally isolated from human saliva. Common gastrointestinal bacterium used in food production. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012984:1074721 | 1074721 | 1103599 | 28879 | Lactobacillus plantarum JDM1, complete genome | 0 | 8274 | BLASTN svg | BLASTP svg |
NC_004567:1089231 | 1089231 | 1114901 | 25671 | Lactobacillus plantarum WCFS1, complete genome | 3e-39 | 170 | BLASTN svg | BLASTP svg |
NC_010610:107500 | 107500 | 134852 | 27353 | Lactobacillus fermentum IFO 3956, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_006300:600516 | 600516 | 631510 | 30995 | Mannheimia succiniciproducens MBEL55E, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
NC_010610:1580483* | 1580483 | 1629244 | 48762 | Lactobacillus fermentum IFO 3956, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013198:2088780* | 2088780 | 2119352 | 30573 | Lactobacillus rhamnosus GG, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_018704:2417902 | 2417902 | 2439408 | 21507 | Amphibacillus xylanus NBRC 15112, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008525:606986 | 606986 | 630273 | 23288 | Pediococcus pentosaceus ATCC 25745, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012704:696374 | 696374 | 717099 | 20726 | Corynebacterium kroppenstedtii DSM 44385, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_011750:1034919 | 1034919 | 1066228 | 31310 | Escherichia coli IAI39 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_007929:1637261 | 1637261 | 1656080 | 18820 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008258:2100646 | 2100646 | 2131889 | 31244 | Shigella flexneri 5 str. 8401, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004741:2081649 | 2081649 | 2113006 | 31358 | Shigella flexneri 2a str. 2457T, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004337:2098736 | 2098736 | 2128599 | 29864 | Shigella flexneri 2a str. 301, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014011:1760793* | 1760793 | 1794282 | 33490 | Aminobacterium colombiense DSM 12261 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010634:4463727 | 4463727 | 4499178 | 35452 | Yersinia pseudotuberculosis PB1/+, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004663:2437760 | 2437760 | 2481279 | 43520 | Bacteroides thetaiotaomicron VPI-5482, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014219:2253023* | 2253023 | 2274612 | 21590 | Bacillus selenitireducens MLS10 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018515:4334240* | 4334240 | 4376329 | 42090 | Desulfosporosinus meridiei DSM 13257 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009922:2766397* | 2766397 | 2789599 | 23203 | Alkaliphilus oremlandii OhILAs, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |