Pre_GI: BLASTN Hits

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Query: NC_004349:3938 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Start: 3938, End: 26099, Length: 22162

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome02454BLASTN svgBLASTP svg
NC_004347:44411104441110446506923960Shewanella oneidensis MR-1, complete genome02452BLASTN svgBLASTP svg
NC_009997:36610833661083368965128569Shewanella baltica OS195, complete genome02228BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome02224BLASTN svgBLASTP svg
NC_009052:1211989*1211989123680124813Shewanella baltica OS155, complete genome02093BLASTN svgBLASTP svg
NC_009052:144619*14461916288518267Shewanella baltica OS155, complete genome02091BLASTN svgBLASTP svg
NC_009052:4168776*4168776418945120676Shewanella baltica OS155, complete genome01665BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome01467BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete01287BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence01269BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid01259BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome01201BLASTN svgBLASTP svg
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence01130BLASTN svgBLASTP svg
NC_004757:90541790541793018024764Nitrosomonas europaea ATCC 19718, complete genome01114BLASTN svgBLASTP svg
NC_011667:1*11990019900Thauera sp. MZ1T plasmid pTha01, complete sequence01088BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,0930BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome0888BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome1e-143517BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-140507BLASTN svgBLASTP svg
NC_008341:29038290385221923182Nitrosomonas eutropha C91 plasmid1, complete sequence1e-140507BLASTN svgBLASTP svg
NC_008344:1364142*1364142138709922958Nitrosomonas eutropha C91, complete genome1e-140507BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete1e-140507BLASTN svgBLASTP svg
NC_008740:14149261414926144139326468Marinobacter aquaeolei VT8, complete genome2e-136494BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence1e-125458BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome3e-123450BLASTN svgBLASTP svg
NC_009052:25123732512373255632743955Shewanella baltica OS155, complete genome9e-102379BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome5e-100373BLASTN svgBLASTP svg
NC_009997:72684072684075726930430Shewanella baltica OS195, complete genome3e-83317BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome1e-82315BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-79305BLASTN svgBLASTP svg
NC_009998:62000620008799926000Shewanella baltica OS195 plasmid pS19501, complete sequence5e-57230BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_009350:698769872583118845Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete3e-46194BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome4e-42180BLASTN svgBLASTP svg
NC_002488:18126961812696186320850513Xylella fastidiosa 9a5c, complete genome4e-39170BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome4e-36161BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome1e-35159BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-29137BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-21111BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-20109BLASTN svgBLASTP svg
NC_004556:10760631076063110003523973Xylella fastidiosa Temecula1, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010694:3178842*3178842319909920258Erwinia tasmaniensis, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003919:28240002824000285062126622Xanthomonas axonopodis pv. citri str. 306, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010334:20909902090990211409923110Shewanella halifaxensis HAW-EB4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014550:88950088950091578326284Arthrobacter arilaitensis Re117, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013508:18628961862896188607023175Edwardsiella tarda EIB202, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010334:15616911561691159069529005Shewanella halifaxensis HAW-EB4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009997:23529482352948238309930152Shewanella baltica OS195, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete3e-0661.9BLASTN svgBLASTP svg