Pre_GI: BLASTN Hits

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Query: NC_002950:1981155 Porphyromonas gingivalis W83, complete genome

Start: 1981155, End: 2004311, Length: 23157

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015571:168617*16861719730428688Porphyromonas gingivalis TDC60, complete genome019040BLASTN svgBLASTP svg
NC_010729:20381182038118205650218385Porphyromonas gingivalis ATCC 33277, complete genome03743BLASTN svgBLASTP svg
NC_015501:12004111200411122563725227Porphyromonas asaccharolytica DSM 20707 chromosome, complete3e-21111BLASTN svgBLASTP svg
NC_019960:1658657*1658657174985291196Prevotella dentalis DSM 3688 chromosome 1, complete sequence8e-1693.7BLASTN svgBLASTP svg
NC_002950:353549*35354937859925051Porphyromonas gingivalis W83, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015571:722815*72281574581723003Porphyromonas gingivalis TDC60, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008260:29612912961291298426722977Alcanivorax borkumensis SK2, complete genome3e-0661.9BLASTN svgBLASTP svg