Pre_GI: BLASTN Hits

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Query: NC_002947:5961096 Pseudomonas putida KT2440, complete genome

Start: 5961096, End: 5984395, Length: 23300

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome01409BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome01176BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-57232BLASTN svgBLASTP svg
NC_018691:46192454619245464565226408Alcanivorax dieselolei B5 chromosome, complete genome5e-48200BLASTN svgBLASTP svg
NC_014532:11087511087513531724443Halomonas elongata DSM 2581, complete genome4e-45190BLASTN svgBLASTP svg
NC_015563:33494233494235315818217Delftia sp. Cs1-4 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_005773:20800020800023117523176Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-37165BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-36163BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-36161BLASTN svgBLASTP svg
NC_008786:36818473681847370092519079Verminephrobacter eiseniae EF01-2, complete genome4e-33151BLASTN svgBLASTP svg
NC_002947:4293252*4293252431746924218Pseudomonas putida KT2440, complete genome2e-32149BLASTN svgBLASTP svg
NC_003919:4618988*4618988466090741920Xanthomonas axonopodis pv. citri str. 306, complete genome9e-31143BLASTN svgBLASTP svg
NC_010524:4402478*4402478442898926512Leptothrix cholodnii SP-6, complete genome2e-28135BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome9e-28133BLASTN svgBLASTP svg
NC_015424:3890293*3890293391528924997Aeromonas veronii B565 chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_011901:39215392156338824174Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete1e-26129BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-26127BLASTN svgBLASTP svg
NC_007645:6500059*6500059654594145883Hahella chejuensis KCTC 2396, complete genome9e-25123BLASTN svgBLASTP svg
NC_014541:41679164167916419249724582Ferrimonas balearica DSM 9799 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_018868:28675002867500289242724928Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_012856:20719420719423833931146Ralstonia pickettii 12D chromosome 1, complete genome5e-20107BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_013959:156991*15699117916522175Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_010622:249625*24962530832658702Burkholderia phymatum STM815 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_011071:42358304235830426191326084Stenotrophomonas maltophilia R551-3, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010120:19994219994222285022909Neisseria meningitidis 053442, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010943:44766544476654449856421911Stenotrophomonas maltophilia K279a, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012997:46217644621764464391922156Teredinibacter turnerae T7901, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015947:41968004196800422059923800Burkholderia sp. JV3 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011420:2803196*2803196282514221947Rhodospirillum centenum SW, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014666:78385007838500786209823599Frankia sp. EuI1c chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010681:12345001234500126213227633Burkholderia phytofirmans PsJN chromosome 1, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_007802:1484641*1484641150591621276Jannaschia sp. CCS1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011146:3537546*3537546356804230497Geobacter bemidjiensis Bem, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020304:256000*25600027839122392Desulfocapsa sulfexigens DSM 10523, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014972:23282282328228236343935212Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013209:19697341969734199351223779Acetobacter pasteurianus IFO 3283-01, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007614:620500*62050064203621537Nitrosospira multiformis ATCC 25196 chromosome 1, complete7e-0763.9BLASTN svgBLASTP svg
NC_010162:3177324*3177324319730419981Sorangium cellulosum 'So ce 56', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016027:16471101647110169572448615Gluconacetobacter xylinus NBRC 3288, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009648:4656187*4656187467706020874Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome3e-0661.9BLASTN svgBLASTP svg