Pre_GI: BLASTN Hits

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Query: NC_002928:123126 Bordetella parapertussis 12822, complete genome

Start: 123126, End: 163566, Length: 40441

Host Lineage: Bordetella parapertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an infected infant in Germany in 1993. Causes respiratory illness in humans and sheep. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. Bordetella parapertussis can infect humans and sheep and it is unable to persist in the environment. This organism causes a respiratory disease similar to, but less severe than, Bordetella pertussis in humans and a chronic pneumonia in sheep.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002927:11898211898216220243221Bordetella bronchiseptica RB50, complete genome033470BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome03560BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome8e-122446BLASTN svgBLASTP svg
NC_007948:41765794176579420490428326Polaromonas sp. JS666, complete genome9e-20107BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009138:11389171138917117310234186Herminiimonas arsenicoxydans, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010645:73573735739609922527Bordetella avium 197N, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012791:20529232052923208497632054Variovorax paradoxus S110 chromosome 1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_012559:2663747*2663747271401150265Laribacter hongkongensis HLHK9, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-1179.8BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-1179.8BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-1179.8BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009074:30297163029716304855618841Burkholderia pseudomallei 668 chromosome I, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_008639:2968000*2968000302586557866Chlorobium phaeobacteroides DSM 266, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013173:36793263679326373266253337Desulfomicrobium baculatum DSM 4028, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007404:1964935*1964935200068635752Thiobacillus denitrificans ATCC 25259, complete genome5e-0661.9BLASTN svgBLASTP svg