Pre_GI: BLASTP Hits

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Query: NC_021182:3771523:3785933 Clostridium pasteurianum BC1, complete genome

Start: 3785933, End: 3786214, Length: 282

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013517:1849912:186011218601121860390279Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit8e-2199
NC_015389:616430:624853624853625134282Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIB component, Gat family4e-1890.1
NC_014363:427393:435955435955436245291Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit8e-1579
NC_014624:1675500:176003717600371760312276Eubacterium limosum KIST612 chromosome, complete genomePTS system protein5e-0856.2
NC_002570:207555:208899208899209183285Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, B component5e-0753.1
NC_003197:3971905:398366439836643983951288Salmonella typhimurium LT2, complete genomeputative periplasmic protein6e-0752.8
NC_011083:3985618:399787339978733998160288Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative IIB component of PTS system6e-0752.8
NC_003198:3855157:386484538648453865132288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIB component6e-0752.8
NC_006905:3913988:392333139233313923618288Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein6e-0752.8
NC_011149:3895921:390817639081763908463288Salmonella enterica subsp. enterica serovar Agona str. SL483,putative IIB component of PTS system6e-0752.8
NC_010102:3919999:393175839317583932045288Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0752.8
NC_011080:3941909:395424839542483954535288Salmonella enterica subsp. enterica serovar Newport str. SL254,putative IIB component of PTS system6e-0752.8
NC_004631:3841975:385033538503353850622288Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIB component of PTS system6e-0752.8
NC_006511:3759550:377179637717963772083288Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIB component6e-0752.8
NC_016863:3933848:394496339449633945250288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-0752.8
NC_016860:3995445:400656040065604006847288Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system IIB protein6e-0752.8
NC_016857:3993864:400497840049784005265288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system IIB component6e-0752.8
NC_016856:3985597:399735639973563997643288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-0752.8
NC_016810:3993863:400497740049774005264288Salmonella enterica subsp. enterica serovar Typhimurium strputative IIB component of PTS system6e-0752.8
NC_011147:3755725:376747537674753767762288Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIB6e-0752.8
NC_011094:3853036:386537638653763865663288Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system transporter subunit IIB6e-0752.8
NC_010473:4630361:463008646300864630364279Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme IIB component of PTS2e-0651.2
NC_000913:4528278:452827845282784528556279Escherichia coli K12, complete genomepredicted enzyme IIB component of PTS2e-0651.2
AC_000091:4534935:453493545349354535213279Escherichia coli W3110 DNA, complete genomepredicted enzyme IIB component of PTS2e-0651.2
NC_011742:4873351:487307648730764873354279Escherichia coli S88 chromosome, complete genomeenzyme IIB component of PTS; KpLE2 phage-like element2e-0651.2
NC_012759:4467288:446701344670134467291279Escherichia coli BW2952 chromosome, complete genomeputative enzyme IIB component of PTS2e-0651.2
NC_012947:3883484:390343739034373903715279Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeprotein-N(pi)-phosphohistidine--sugar phosphotransferase2e-0651.2
NC_012967:4510393:451039345103934510671279Escherichia coli B str. REL606 chromosome, complete genomeputative PTS system transporter subunit IIB2e-0651.2
NC_008555:2628858:264509526450952645376282Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, galactitol-specific, IIB component2e-0651.2
NC_003212:2814737:283100028310002831281282Listeria innocua Clip11262, complete genomehypothetical protein2e-0651.2
NC_003210:2721559:274005227400522740333282Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-0651.2
NC_014363:427393:444980444980445261282Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-0651.2
NC_014650:2417509:242851324285132428797285Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific subunit IIB3e-0650.4
NC_017047:3793000:380869238086923808976285Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB4e-0650.4
NC_015061:3725921:374404637440463744330285Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase4e-0650.4
NC_016818:3736213:375149537514953751779285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIB7e-0649.3