Pre_GI: BLASTP Hits

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Query: NC_021182:1983456:1996824 Clostridium pasteurianum BC1, complete genome

Start: 1996824, End: 1997048, Length: 225

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1761789:177547617754761775700225Clostridium pasteurianum BC1, complete genomehydrogenase assembly chaperone HypC/HupF8e-36148
NC_011898:513835:532624532624532848225Clostridium cellulolyticum H10, complete genomehydrogenase assembly chaperone hypC/hupF5e-1373.2
NC_015958:141500:149898149898150140243Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF1e-1168.2
NC_019942:987134:104940910494091049648240Aciduliprofundum sp. MAR08-339, complete genomehydrogenase assembly chaperone HypC/HupF2e-1167.8
NC_012483:3529895:354117035411703541436267Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase assembly chaperone HypC/HupF2e-1167.4
NC_013921:1614397:162049616204961620738243Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF3e-1167.4
NC_014209:1580423:158647015864701586712243Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase assembly chaperone hypC/hupF4e-1167
NC_015555:114977:124952124952125191240Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase assembly chaperone hypC/hupF7e-1165.9
NC_015565:348941:369869369869370093225Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase assembly chaperone hypC/hupF1e-1065.1
NC_015499:1097432:110325911032591103528270Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF2e-1064.7
NC_013730:4636575:465487046548704655145276Spirosoma linguale DSM 74, complete genomehydrogenase assembly chaperone hypC/hupF2e-1064.3
NC_007626:1746475:177918117791811779417237Magnetospirillum magneticum AMB-1, complete genomeHydrogenase maturation factor1e-0962
NC_004463:1898648:1898648189864819003931746Bradyrhizobium japonicum USDA 110, complete genomehydrogenase maturation protein3e-0960.5
NC_013222:229190:249990249990250247258Robiginitalea biformata HTCC2501, complete genomehydrogenase expression/formation protein; HypC2e-0857.4
NC_020411:28995:459084590846147240Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein HypC4e-0857
NC_015557:30622:458744587446113240Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF4e-0857
NC_015587:28997:459104591046149240Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase assembly chaperone hypC/hupF4e-0857
NC_007413:5742406:575924257592425759502261Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/formation protein (HUPF/HYPC)5e-0856.2
NC_003272:784437:803006803006803254249Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein7e-0855.8
NC_017192:1841987:185479118547911855072282Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypC2e-0754.7
NC_010001:2125500:214025121402512140478228Clostridium phytofermentans ISDg, complete genomehydrogenase assembly chaperone hypC/hupF2e-0754.7
NC_014328:2518081:253091625309162531122207Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrogenase expression/formation protein2e-0754.3
NC_009801:3013838:301505530150553015327273Escherichia coli E24377A, complete genomehydrogenase assembly chaperone HypC/HupF4e-0753.5
NC_008253:2828573:282943628294362829708273Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HypC4e-0753.5
NC_009937:673820:676251676251676550300Azorhizobium caulinodans ORS 571, complete genomehydrogenase expression/formation protein5e-0753.1
NC_007575:1484305:149430414943041494594291Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/formation protein (HUPF/HYPC)6e-0752.8
NC_011740:2986514:300153230015323001780249Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2 accessory protein7e-0752.8
NC_010067:84093:112209112209112481273Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0752.4
NC_009720:2424975:244490824449082445207300Xanthobacter autotrophicus Py2, complete genomehydrogenase assembly chaperone hypC/hupF2e-0651.6
NC_010794:1673049:167419916741991674489291Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase metallocenter assembly protein HypC2e-0651.2
NC_016627:1133759:114614511461451146360216Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase assembly chaperone HypC/HupF2e-0651.2
NC_010336:852915:864108864108864323216Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein (HUPF/HYPC)3e-0650.8
NC_008340:2272692:228972322897232289950228Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase assembly chaperone hypC/hupF3e-0650.4
NC_017273:352150:372604372604372873270Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase assembly chaperone HypC/HupF5e-0650.1
NC_010334:2749250:275249827524982752746249Shewanella halifaxensis HAW-EB4, complete genomehydrogenase assembly chaperone hypC/hupF8e-0649.3
NC_014122:549932:566429566429566668240Methanocaldococcus infernus ME chromosome, complete genomehydrogenase assembly chaperone hypC/hupF8e-0649.3
NC_009901:2427291:245144324514432451691249Shewanella pealeana ATCC 700345, complete genomehydrogenase assembly chaperone hypC/hupF8e-0649.3