Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5157875 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5157875, End: 5159356, Length: 1482

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4632866463286646343471482Pseudomonas aeruginosa PA7 chromosome, complete genomeDNA helicase01003
NC_008463:5313527:5328614532861453300951482Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative helicase0994
NC_004129:5373886:5428460542846054299201461Pseudomonas fluorescens Pf-5, complete genomehypothetical protein0813
NC_007005:1636875:1638691163869116401541464Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein0666
NC_004578:934867:9503879503879518441458Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein0664
NC_012779:346998:3756613756613771331473Edwardsiella ictaluri 93-146, complete genomeDNA helicase5e-106385
NC_009832:4482500:4489655448965544911001446Serratia proteamaculans 568, complete genomehypothetical protein8e-105381
NC_004547:667988:6833326833326847921461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-104379
NC_014029:331919:3985423985423999871446Yersinia pestis Z176003 chromosome, complete genomehelicase IV2e-103376
NC_004631:4494000:4508342450834245098531512Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative DNA helicase3e-103375
NC_003198:4513900:4525533452553345270441512Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA helicase3e-103375
NC_012125:4559990:4574162457416245756731512Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA helicase3e-103375
NC_016832:4482437:4496610449661044981211512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,DNA helicase3e-103375
NC_009801:3374501:3376149337614933776781530Escherichia coli E24377A, complete genomehypothetical protein3e-103375
NC_008757:111292:1138381138381155051668Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completesuperfamily I DNA and RNA helicases-like protein3e-54213
NC_008255:4043045:4062538406253840643401803Cytophaga hutchinsonii ATCC 33406, complete genomesuperfamily I DNA and RNA helicase1e-43177
NC_016109:8761557:8772362877236287747732412Kitasatospora setae KM-6054, complete genomeputative helicase1e-42174
NC_016109:1:85068506109172412Kitasatospora setae KM-6054, complete genomeputative helicase1e-42174
NC_010572:1:2224022240237091470Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA helicase8e-39162
NC_010572:8493946:8522221852222185236901470Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA helicase8e-39162
NC_016603:3475843:3492753349275334942551503Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeputative DNA helicase6e-30132
NC_010682:1652636:1658054165805416595141461Ralstonia pickettii 12J chromosome 1, complete sequenceputative DNA helicase5e-29129
NC_018679:1738126:1747871174787117499672097Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeUvrD/REP helicase3e-26120
NC_014377:1943476:1963225196322519652762052Thermosediminibacter oceani DSM 16646 chromosome, complete genomeUvrD/REP helicase4e-23109
NC_007498:919697:9368339368339387731941Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-0861.2
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase5e-0653.1