Pre_GI: BLASTP Hits

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Query: NC_018080:2288700:2312142 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 2312142, End: 2312387, Length: 246

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:1297851:133053813305381330783246Pseudomonas mendocina ymp, complete genomeXRE family transcriptional regulator2e-23107
NC_006351:520500:521079521079521324246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein4e-21100
NC_015379:908904:937726937726937971246Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, Cro/Ci family2e-2098.2
NC_010322:4623867:467058446705844670829246Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator2e-2097.8
NC_010682:460523:491925491925492170246Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, XRE family3e-2097.1
NC_006351:520500:522475522475522720246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein5e-1993.2
NC_007510:3340008:334567233456723345986315Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family5e-1683.2
NC_008061:2582000:259167425916742591919246Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, XRE family9e-1682.4
NC_008543:2666846:267507026750702675315246Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, XRE family9e-1682.4
NC_007650:2429307:245966124596612459864204Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein6e-1579.7
NC_007650:2429307:245827324582732458473201Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein8e-1475.5
NC_010512:1015557:102764110276411027886246Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, XRE family4e-1373.6
NC_007510:1959883:200793820079382008219282Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family8e-1372.4
NC_014500:3097362:313932931393293139574246Dickeya dadantii 3937 chromosome, complete genomehypothetical protein4e-1167
NC_012912:1701231:171734517173451717590246Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family4e-1167
NC_010571:4483500:448599644859964486226231Opitutus terrae PB90-1, complete genometranscriptional regulator, XRE family3e-0960.8
NC_015677:285896:300214300214300459246Ramlibacter tataouinensis TTB310 chromosome, complete genomeXRE family transcriptional regulator3e-0960.5
NC_013446:1648556:169582916958291696128300Comamonas testosteroni CNB-2, complete genometranscriptional regulator, XRE family6e-0959.7
NC_020829:940692:947744947744947956213Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-0857
NC_015572:4916430:492508549250854925324240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0755.5
NC_009434:695582:749946749946750173228Pseudomonas stutzeri A1501, complete genomeCro/CI family transcriptional regulator2e-0754.7
NC_009656:44500:901009010090321222Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-0753.9
NC_015572:1:100251002510264240Methylomonas methanica MC09 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0753.5
NC_011662:2402408:240955324095532409810258Thauera sp. MZ1T, complete genometranscriptional regulator, XRE family4e-0753.5
NC_007508:2941889:295324729532472953522276Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-0753.5
NC_013132:782846:785123785123785347225Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family7e-0752.8
NC_016616:2997348:300945030094503009686237Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator1e-0652
NC_014216:2860342:286928428692842869517234Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometranscriptional regulator, XRE family1e-0652
NC_008740:220642:235926235926236135210Marinobacter aquaeolei VT8, complete genome2e-0651.2
NC_010002:2518599:253459725345972534992396Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family2e-0651.2
NC_014006:3124818:313237831323783132620243Sphingobium japonicum UT26S chromosome 1, complete genomeXre-family transcriptional regulator2e-0651.2
NC_018691:3041851:306006930600693060359291Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator2e-0650.8
NC_016147:1961000:198513019851301985420291Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0649.7