Pre_GI: BLASTP Hits

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Query: NC_018000:1877183:1887339 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 1887339, End: 1888115, Length: 777

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010506:2146444:215187221518722152747876Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, LysR family6e-28124
NC_009255:1105786:114008611400861141009924Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator9e-24110
NC_010805:575709:590489590489591412924Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator9e-24110
NC_010086:1816378:188389218838921884815924Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family9e-24110
NC_010501:4311873:431328943132894314200912Pseudomonas putida W619, complete genometranscriptional regulator, LysR family1e-1686.7
NC_007963:2644930:265185826518582652814957Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family2e-1686.3
NC_002516:2306776:232633423263342327287954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-1479.7
NC_013173:3890370:390586339058633906753891Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, LysR family3e-1065.9
NC_012491:6143928:616137461613746162246873Brevibacillus brevis NBRC 100599, complete genometranscriptional regulator2e-1065.9
NC_012660:4734363:473467847346784735574897Pseudomonas fluorescens SBW25 chromosome, complete genomeLysR family transcriptional regulator8e-0961.2
NC_000964:1474451:148535114853511486232882Bacillus subtilis subsp. subtilis str. 168, complete genometranscriptional regulator (LysR family)1e-0860.5
NC_019896:2579036:258298825829882583869882Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePutative HTH-type transcriptional regulator YkuM1e-0860.5
NC_015663:5253242:527273552727355273592858Enterobacter aerogenes KCTC 2190 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_015275:3761889:376374637637463764609864Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, LysR family2e-0860.1
NC_009511:2726296:273916127391612740096936Sphingomonas wittichii RW1 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_014828:1632000:164093116409311641830900Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, LysR family1e-0860.1
NC_006350:1084930:108493010849301085826897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0859.3
NC_009925:1003000:101786010178601018756897Acaryochloris marina MBIC11017, complete genometranscriptional regulator, LysR family3e-0858.9
NC_014618:2705769:271885427188542719768915Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator5e-0858.2
NC_020453:3103549:310828131082813109204924Agromonas oligotrophica S58 DNA, complete genomehypothetical protein9e-0857.4
NC_016641:2291363:229276922927692293662894Paenibacillus terrae HPL-003 chromosome, complete genomeLysR family transcriptional regulator1e-0757
NC_009255:916000:918699918699919616918Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator2e-0756.6
NC_013739:2057781:2076477207647720775081032Conexibacter woesei DSM 14684, complete genometranscriptional regulator, LysR family2e-0756.6
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator2e-0756.2
NC_013515:550464:552082552082552978897Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, LysR family2e-0756.2
NC_010508:2776283:280057828005782801465888Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family3e-0755.5
NC_019673:1420198:143785814378581438763906Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family4e-0755.5
NC_015727:1076927:108784310878431088742900Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator5e-0755.1
NC_013446:2062862:207473420747342075612879Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family5e-0755.1
NC_011894:957897:966713966713967615903Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family7e-0754.3
NC_016612:477407:497779497779498675897Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_014640:4031336:405960440596044060575972Achromobacter xylosoxidans A8 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_015381:1318818:133827613382761339097822Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator1e-0653.5
NC_014910:1050706:105721010572101058112903Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein1e-0653.5
NC_007348:2519447:252462125246212525511891Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein, LysR:LysR, substrate-binding2e-0653.5
NC_007963:2644930:267232126723212673205885Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family2e-0653.1
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0653.1
NC_013209:2414500:242528124252812426222942Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator LysR3e-0652.8
NC_017100:2414075:242648824264882427429942Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator LysR3e-0652.8
NC_017108:2413000:242382524238252424766942Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator LysR3e-0652.8
NC_017111:2413000:242384324238432424784942Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator LysR3e-0652.8
NC_017121:2413000:242383024238302424771942Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator LysR3e-0652.8
NC_017125:2415500:242646824264682427409942Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator LysR3e-0652.8
NC_017146:2416000:242651024265102427451942Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator LysR3e-0652.8
NC_014541:4167916:417125541712554172199945Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, LysR family2e-0652.8
NC_004578:4708220:471062747106274711544918Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator MetR2e-0652.8
NC_020829:2022000:202767020276702028554885Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator3e-0652.4
NC_008699:857837:875971875971876963993Nocardioides sp. JS614, complete genomeLysR, substrate-binding3e-0652.4
NC_015311:403281:446927446927447889963Prevotella denticola F0289 chromosome, complete genomeputative hydrogen peroxide-inducible protein activator3e-0652.4
NC_016641:4290350:429276142927614293657897Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator ywqm4e-0652
NC_009615:1469642:151261415126141513540927Parabacteroides distasonis ATCC 8503 chromosome, complete genomeredox-sensitive transcriptional activator OxyR4e-0652
NC_008781:2883968:290409629040962905004909Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family5e-0651.6
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator7e-0651.2
NC_020410:2509057:252344325234432524342900Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (LysR family)7e-0651.2
NC_013716:2476334:248837124883712489297927Citrobacter rodentium ICC168, complete genomeLysR-family transcriptional regulator7e-0651.2
NC_013971:2478676:248239124823912483320930Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH dehydrogenase operon transcriptional regulator8e-0650.8
NC_013961:2441148:244486324448632445792930Erwinia amylovora, complete genomeprobable HTH-type transcriptional regulator lrhA8e-0650.8
NC_014829:259707:262669262669263559891Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, LysR family8e-0650.8
NC_004129:2328491:235442323544232355340918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family1e-0550.8