Pre_GI: BLASTP Hits

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Query: NC_017249:263873:265374 Bradyrhizobium japonicum USDA 6, complete genome

Start: 265374, End: 265943, Length: 570

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010625:1370462:139744613974461398036591Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, TetR family5e-52203
NC_011001:568970:568970568970569545576Burkholderia cenocepacia J2315 chromosome 2, complete sequenceTetR family regulatory protein8e-51199
NC_013956:1762171:178770317877031788275573Pantoea ananatis LMG 20103 chromosome, complete genomeYdhM2e-49194
NC_014258:42262:438174381744380564Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator2e-47188
NC_009925:2240871:225482422548242255411588Acaryochloris marina MBIC11017, complete genometranscriptional regulator, TetR family2e-1789
NC_002678:3701500:370335737033573703944588Mesorhizobium loti MAFF303099, complete genometranscriptional regulator (tetR-family)2e-1788.6
NC_011887:72364:813868138681883498Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, TetR family6e-1684
NC_010557:207846:223133223133223699567Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, TetR family7e-1683.6
NC_016514:1183356:118976111897611190348588Enterobacter cloacae EcWSU1 chromosome, complete genomeTetR family transcriptional Regulator5e-1580.5
NC_014217:716500:720611720611721195585Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, TetR family3e-1477.8
NC_008527:125723:131535131535132074540Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator3e-1374.7
NC_020064:3998715:403922240392224039806585Serratia marcescens FGI94, complete genometranscriptional regulator1e-1272.8
NC_008390:2156188:217708321770832177646564Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, TetR family2e-1272
NC_004578:4781326:480170948017094802299591Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, TetR family3e-1168.6
NC_012791:2233098:224178422417842242434651Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, TetR family8e-1166.6
NC_008740:443274:483508483508484074567Marinobacter aquaeolei VT8, complete genometranscriptional regulator, TetR family1e-1065.9
NC_016147:1672482:167954316795431680130588Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator1e-1065.9
NC_011071:1877500:190017419001741900761588Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, TetR family2e-1065.5
NC_008545:115292:127562127562128125564Burkholderia cenocepacia HI2424 plasmid 1, complete sequencetranscriptional regulator, TetR family3e-1065.1
NC_008061:2153495:216160721616072162170564Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, TetR family3e-1065.1
NC_008543:90312:107603107603108166564Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, TetR family3e-1065.1
NC_009659:1024201:104447610444761045036561Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator3e-1064.7
NC_010515:1375091:140668514066851407248564Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-1064.3
NC_004578:4781326:480645848064584807027570Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, TetR family3e-0961.2
NC_009659:1129066:114502411450241145587564Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator1e-0756.2
NC_008750:2332000:234367323436732344257585Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family3e-0755.1
NC_010552:335989:345128345128345691564Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-0652.4