Pre_GI Gene

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Host: NC_011001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:568970 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
568970569545576TetR family regulatory proteinQuickGO ontologyBLASTP
569691570383693glutathione S-transferaseQuickGO ontologyBLASTP
570437570919483putative exported glyoxalaseQuickGO ontologyBLASTP
570916571596681hypothetical proteinBLASTP
571601572572972LysR family regulatory proteinQuickGO ontologyBLASTP
5727085750082301malic enzymeQuickGO ontologyBLASTP
576917577690774putative IstB-like ATP binding proteinQuickGO ontologyBLASTP
5776875787151029putative integraseQuickGO ontologyBLASTP
5795615807391179AAA family ATPaseQuickGO ontologyBLASTP
5813055825041200putative aminotransferaseQuickGO ontologyBLASTP
582517582708192hypothetical proteinBLASTP
582803583390588pyridoxamine 5-phosphate oxidase family proteinQuickGO ontologyBLASTP
583416584306891LysR family regulatory proteinQuickGO ontologyBLASTP
584441585145705putative oxidoreductaseshort-chain dehydrogenaseQuickGO ontologyBLASTP
5853495866261278putative hydrolaseQuickGO ontologyBLASTP
586744587115372hypothetical protein
5872385886231386GntR family regulatory proteinQuickGO ontologyBLASTP