Pre_GI: BLASTP Hits

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Query: NC_017168:3535786:3539082 Yersinia pestis A1122 chromosome, complete genome

Start: 3539082, End: 3539369, Length: 288

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2306500:231502523150252315312288Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-43174
NC_008149:2517538:253000625300062530293288Yersinia pestis Nepal516, complete genomehypothetical protein1e-43174
NC_005810:1663672:166730616673061667593288Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-43174
NC_004088:2691565:269486126948612695148288Yersinia pestis KIM, complete genomehypothetical protein1e-43174