Pre_GI: BLASTP Hits

Some Help

Query: NC_016944:168530:177448 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 177448, End: 177756, Length: 309

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:260271826027182603026309Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-46184
NC_012668:442601:461228461228461536309Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-46184
NC_012667:703852:722799722799723107309Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-46184
NC_002505:168532:177450177450177758309Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, putative1e-46184
NC_008577:4611431:463621346362134636524312Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-26118
NC_008322:4611000:462002446200244620347324Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family2e-26117
NC_004459:3243987:326552532655253265842318Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative transcriptional regulator3e-26117
NC_011663:4943179:495663949566394956953315Shewanella baltica OS223 chromosome, complete genomeXRE family transcriptional regulator1e-24111
NC_015554:4824000:483031748303174830646330Alteromonas sp. SN2 chromosome, complete genomeputative transcriptional regulator4e-24110
NC_014500:4691915:469869546986954699015321Dickeya dadantii 3937 chromosome, complete genomeputative transcriptional regulator4e-1477
NC_015554:1215401:121540112154011215664264Alteromonas sp. SN2 chromosome, complete genomeXRE family transcriptional regulator4e-1476.6
NC_009832:1664238:167864916786491678960312Serratia proteamaculans 568, complete genometranscriptional regulator, XRE family5e-1476.3
NC_012917:4646491:465446146544614654796336Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family2e-1373.9
NC_010515:1205258:122167112216711221997327Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, XRE family2e-1373.9
NC_011001:302500:312973312973313272300Burkholderia cenocepacia J2315 chromosome 2, complete sequencerepressor protein3e-1373.9
NC_014500:4691915:469797946979794698317339Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator7e-1372.8
NC_012792:627500:635668635668635955288Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family1e-1272
NC_013282:551219:574665574665574976312Cronobacter turicensis, complete genomehypothetical protein2e-1271.6
NC_013592:4511478:453250545325054532825321Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family1e-1271.6
NC_013592:4511478:453180945318094532141333Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family2e-1271.2
NC_013364:928486:942494942494942778285Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional regulator2e-1270.9
NC_013353:922937:936945936945937229285Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator2e-1270.9
AP010958:922937:936945936945937229285Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative transcriptional regulator2e-1270.9
NC_011745:2209288:225872622587262259073348Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator5e-1269.7
NC_009074:3409849:341639534163953416706312Burkholderia pseudomallei 668 chromosome I, complete sequenceI C protein7e-1269.3
NC_012917:4646491:465377346537734654090318Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family9e-1268.9
NC_010625:1551430:156982615698261570158333Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, XRE family1e-1168.6
NC_020260:3355814:337648333764833376794312Cronobacter sakazakii Sp291, complete genometranscriptional regulator2e-1168.2
NC_010002:3465509:347095334709533471261309Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family3e-1167.4
NC_014306:4376012:437939943793994379686288Erwinia billingiae Eb661, complete genomeXRE family transcriptional regulator3e-1167
NC_015381:1588742:160161416016141601916303Burkholderia gladioli BSR3 chromosome 1, complete sequenceXRE family transcriptional regulator5e-1166.2
NC_013592:4295449:429755442975544297817264Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family8e-1165.9
NC_016010:1822212:186281218628121863174363Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetranscriptional regulator1e-1065.5
NC_010688:1192410:120134712013471201685339Xanthomonas campestris pv. campestris, complete genomeputative transcriptional regulator2e-1064.7
NC_012214:474359:491886491886492143258Erwinia pyrifoliae Ep1/96, complete genometranscriptional regulator2e-1064.7
NC_003919:1716831:173352317335231733819297Xanthomonas axonopodis pv. citri str. 306, complete genometranscriptional regulator2e-1064.7
NC_013961:441719:475157475157475414258Erwinia amylovora, complete genomeputative transcriptional regulator6e-1062.8
NC_015563:4024450:404130840413084041616309Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1062.8
NC_010943:2465976:247714624771462477472327Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional repressor protein7e-1062.8
NC_013446:4182878:419406341940634194377315Comamonas testosteroni CNB-2, complete genometranscriptional regulator, XRE family1e-0961.6
NC_015137:2616222:265154226515422651877336Burkholderia sp. CCGE1001 chromosome 2, complete sequencehelix-turn-helix domain-containing protein3e-0960.5
NC_009648:3224495:324261132426113242910300Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative transcriptional regulator5e-0960.1
NC_016860:2896254:291193929119392912253315Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator7e-0959.3
NC_011083:2847318:286287928628792863169291Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, XRE family6e-0959.3
NC_010515:1205258:122126812212681221603336Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, XRE family8e-0958.9
NC_020541:1827689:183457118345711834903333Rhodanobacter sp. 2APBS1, complete genomeputative transcription factor, MBF1 like protein9e-0958.9
NC_016863:2844883:285685128568512857207357Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator1e-0858.5
NC_016857:2871689:291093929109392911295357Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator1e-0858.5
NC_016856:2896630:290859829085982908954357Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator1e-0858.5
NC_016810:2871689:291093929109392911295357Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-0858.5
NC_003197:2870268:288837328883732888729357Salmonella typhimurium LT2, complete genomeputative transcriptional regulator1e-0858.5
NC_007508:1221500:123498212349821235338357Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, XRE family2e-0858.2
NC_011001:302500:313367313367313702336Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative repressor protein2e-0857.8
NC_009708:4182460:420045342004534200809357Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDNA binding protein3e-0857.4
NC_012880:3748665:377674537767453777026282Dickeya dadantii Ech703, complete genometranscriptional regulator, XRE family3e-0857
NC_009832:4564752:458205645820564582310255Serratia proteamaculans 568, complete genometranscriptional regulator, XRE family5e-0856.2
NC_003919:3812778:386787438678743868212339Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-0754.7
NC_014500:1066911:108489610848961085162267Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-0754.7
NC_013592:956829:975186975186975452267Dickeya dadantii Ech586, complete genometranscriptional regulator, XRE family2e-0754.7
NC_012912:4194821:419482141948214195018198Dickeya zeae Ech1591, complete genome2e-0754.7
NC_012880:3982383:399645639964563996716261Dickeya dadantii Ech703, complete genometranscriptional regulator, XRE family3e-0753.9
NC_003902:1858349:187450218745021874843342Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-0753.1
NC_016010:1169850:117870511787051179109405Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeputative transcriptional regulator HipB5e-0753.1
NC_016612:2009927:202009120200912020369279Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-0753.1
NC_010688:3229820:324877432487743249016243Xanthomonas campestris pv. campestris, complete genomepredicted transcriptional regulator1e-0652
NC_013421:1819036:184377818437781844077300Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family2e-0651.2
NC_012912:1701231:173067417306741730910237Dickeya zeae Ech1591, complete genomeputative transcriptional regulator3e-0650.8
NC_010688:3030873:305850730585073058869363Xanthomonas campestris pv. campestris, complete genometranscriptional regulator protein4e-0650.1