Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1641139 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1641139, End: 1642773, Length: 1635

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:2589951:2591620259162025932541635Pseudomonas putida KT2440, complete genomeDNA primase/helicase1e-113410
NC_009937:4122652:4129516412951641311711656Azorhizobium caulinodans ORS 571, complete genomeDNA primase1e-74281
NC_014834:3130715:3172458317245831740831626Rhodopseudomonas palustris DX-1 chromosome, complete genomeDNA primase7e-61235
NC_012846:2004711:2012361201236120142441884Bartonella grahamii as4aup, complete genomephage related helicase2e-1274.7
NC_014932:1314881:1342912134291213449122001Bartonella clarridgeiae 73, complete genomehypothetical protein7e-1272.8
NC_006905:368942:3853423853423872221881Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-1171.2
NC_005956:1648000:1658982165898216617412760Bartonella henselae str. Houston-1, complete genomephage related protein2e-1170.9
NC_011601:717072:7331137331137349931881Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein3e-1170.5
NC_012125:1330066:1347049134704913489291881Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-1170.1
NC_011094:593100:6122036122036140351833Salmonella enterica subsp. enterica serovar Schwarzengrund strgp615e-1169.7
NC_010161:2155500:2171501217150121749113411Bartonella tribocorum CIP 105476, complete genomehypothetical protein4e-0860.1
NC_008783:177161:1936551936551960212367Bartonella bacilliformis KC583, complete genomeputative DNA primase/helicase5e-0859.7