Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:81382:83673 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 83673, End: 85046, Length: 1374

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:89441:9173291732931051374Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Trk system potassium uptake protein0868
NC_020209:4768500:4808611480861148099841374Pseudomonas poae RE*1-1-14, complete genomepotassium transporter peripheral membrane component0833
NC_008260:125500:1384861384861398621377Alcanivorax borkumensis SK2, complete genomepotassium uptake protein4e-180630
CP002185:3627992:3649487364948736508631377Escherichia coli W, complete genomeNAD-binding component of TrK potassium transporter2e-159562
NC_006511:3364448:3386158338615833875341377Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpotassium transporter peripheral membrane component3e-159561
NC_013282:3962188:3981417398141739827931377Cronobacter turicensis, complete genomeTrk system potassium uptake protein trkA1e-157556
NC_014109:393500:4182604182604196301371Candidatus Riesia pediculicola USDA chromosome, complete genomeTrk system potassium uptake protein TrkA (K(+)-uptake protein trkA)6e-97355
NC_012108:4118888:4118888411888841202551368Desulfobacterium autotrophicum HRM2, complete genomeTrkA48e-79294
NC_020409:437781:4919364919364933061371Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTrkA-N domain protein5e-75282
NC_015948:2032399:2033575203357520349691395Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeTrk potassium uptake system protein3e-54213
NC_009615:3146376:3156863315686331582001338Parabacteroides distasonis ATCC 8503 chromosome, complete genomepotassium transporter peripheral membrane protein1e-51204
NC_015160:2191919:2193872219387221952121341Odoribacter splanchnicus DSM 20712 chromosome, complete genomeTrkA-N domain-containing protein2e-48193
NC_014221:266638:2834752834752848301356Truepera radiovictrix DSM 17093 chromosome, complete genomeTrkA-N domain protein4e-47189
NC_015977:3127500:3145643314564331470011359Roseburia hominis A2-183 chromosome, complete genomeTrkA-N domain containing protein5e-47189
NC_014314:69872:8691886918882821365Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeTrkA-N domain-containing protein3e-46186
NC_016630:1890917:1903072190307219044451374Filifactor alocis ATCC 35896 chromosome, complete genomepotassium uptake protein, Trk family4e-44179
NC_019962:1750497:1775687177568717770211335Natrinema pellirubrum DSM 15624, complete genomeK+ transport system, NAD-binding component1e-43177
NC_013923:45876:5716857168585021335Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceTrkA-N domain protein3e-42173
NC_006138:799174:8006748006748020801407Desulfotalea psychrophila LSv54, complete genomeTrk system potassium uptake protein (TrkA)1e-41171
NC_003454:865368:8653688653688667261359Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTrk system potassium uptake protein trkA2e-35150
NC_015577:3776295:3777761377776137792091449Treponema azotonutricium ZAS-9 chromosome, complete genomeTrk system potassium uptake protein TrkA5e-33142
NC_014926:295988:3232593232593245541296Thermovibrio ammonificans HB-1 chromosome, complete genomeTrkA-N domain protein2e-23110
NC_015379:89441:100341100341100508168Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein8e-1892
NC_012883:1603744:162003316200331620728696Thermococcus sibiricus MM 739, complete genomeTrk-type pottasium transport system, NAD-binding component1e-1791.3
NC_013715:1376985:139986213998621400515654Rothia mucilaginosa DY-18, complete genomeK+ transport system, NAD-binding component2e-1791.3
NC_016629:3496630:351821135182113518885675Desulfovibrio africanus str. Walvis Bay chromosome, completeTrkA-N domain-containing protein4e-1789.7
NC_007644:1847000:184865818486581849326669Moorella thermoacetica ATCC 39073, complete genomeTrkA6e-1685.9
NC_003413:181525:185009185009185701693Pyrococcus furiosus DSM 3638, complete genometrk system potassium uptake - like protein1e-1584.7
NC_000868:1730820:174734917473491748032684Pyrococcus abyssi GE5, complete genomeTRK potassium uptake system protein2e-1584
NC_015714:542679:5464825464825478821401Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeTrk family potassium (K+) transporter, membrane protein6e-1582.4
NC_010741:546573:5503775503775517771401Treponema pallidum subsp. pallidum SS14, complete genomeK+ transport protein3e-1480.5
NC_000919:545141:5489455489455503451401Treponema pallidum subsp. pallidum str. Nichols, complete genomeK+ transport protein (trkA)3e-1480.5
NC_016842:546661:5504655504655518651401Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeTrk family potassium (K+) transporter, membrane protein3e-1480.5
NC_016843:547149:5509535509535523531401Treponema pallidum subsp. pertenue str. Gauthier chromosome,Trk family potassium (K+) transporter, membrane protein3e-1480.5
NC_016844:547069:5508735508735522731401Treponema pallidum subsp. pallidum DAL-1 chromosome, completeTrk family potassium (K+) transporter, membrane protein3e-1480.5
NC_016848:547115:5509195509195523191401Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeTrk family potassium (K+) transporter, membrane protein3e-1480.5
NC_021508:546592:5503965503965517961401Treponema pallidum subsp. pallidum SS14, complete genomeTrk family potassium (K+) transporter, membrane protein3e-1480.5
NC_017268:546376:5501175501175515801464Treponema pallidum subsp. pallidum str. Chicago chromosome,potassium transporter peripheral membrane protein3e-1480.1
NC_013926:511674:525385525385526032648Aciduliprofundum boonei T469 chromosome, complete genomeTrkA-N domain protein3e-1480.1
NC_015474:723553:746588746588747274687Pyrococcus sp. NA2 chromosome, complete genomeTRK potassium uptake system protein1e-1378.6
NC_013929:2696648:271356727135672714244678Streptomyces scabiei 87.22 chromosome, complete genomepotassium uptake protein8e-1272
NC_014246:1991093:200808820080882008732645Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTrkA-N domain-containing protein3e-1170.1
NC_013929:2696648:271289627128962713567672Streptomyces scabiei 87.22 chromosome, complete genomepotassium uptake protein5e-1169.3
NC_014246:1991093:200873520087352009544810Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTrkA domain-containing protein2e-1067.4
NC_019974:1280500:129581412958141296476663Natronococcus occultus SP4, complete genomeK+ transport system, NAD-binding component4e-1066.6
NC_019962:1750497:183698618369861837696711Natrinema pellirubrum DSM 15624, complete genomeK+ transport system, NAD-binding component1e-0964.7
NC_019978:2293327:230466623046662305331666Halobacteroides halobius DSM 5150, complete genomeK+ transport system, NAD-binding component2e-0964.3
NC_013715:1376985:139899513989951399861867Rothia mucilaginosa DY-18, complete genomeK+ transport system, NAD-binding component3e-0963.2
NC_014253:1954024:1957349195734919591841836Methanohalobium evestigatum Z-7303 chromosome, complete genomesodium/hydrogen exchanger7e-0962.4
NC_020304:1097478:110214111021411102818678Desulfocapsa sulfexigens DSM 10523, complete genomeK+ transport system, NAD-binding component1e-0862
NC_007955:545000:553655553655554314660Methanococcoides burtonii DSM 6242, complete genomeK+ transport systems NAD-binding subunit2e-0757.8
NC_007484:1823751:183210718321071832772666Nitrosococcus oceani ATCC 19707, complete genomeK+ transport systems NAD-binding component, TrkA-N2e-0757.4
NC_009033:1042500:105799510579951058639645Staphylothermus marinus F1, complete genomeTrkA-N domain protein4e-0756.6
NC_016629:3496630:351776735177673518210444Desulfovibrio africanus str. Walvis Bay chromosome, completeTrkA-N domain-containing protein6e-0755.8
NC_019964:1961237:196546719654671966123657Halovivax ruber XH-70, complete genomeK+ transport system, NAD-binding component1e-0655.1
NC_014972:1510914:1525955152595515276671713Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTrkA-N domain-containing protein5e-0653.1