Pre_GI: BLASTP Hits

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Query: NC_016830:4999946:5017704 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5017704, End: 5018549, Length: 846

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2234851:223742722374272238272846Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, tail formation protein2e-129461
NC_004578:3817330:383293838329383833702765Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-121435
NC_017986:4124335:412773441277344128579846Pseudomonas putida ND6 chromosome, complete genomepyocin R2 PP, tail formation protein5e-113407
NC_015733:1976752:198025019802501981095846Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, tail formation protein8e-107386
NC_017033:1089579:109284410928441093686843Frateuria aurantia DSM 6220 chromosome, complete genomephage protein U3e-77288
NC_015381:3091500:311565431156543116532879Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein8e-41167
NC_015381:2109500:211267021126702113425756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein2e-40166
NC_015381:3457784:347469734746973475452756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein6e-40164
NC_012724:3070386:308492230849223085800879Burkholderia glumae BGR1 chromosome 1, complete genomePhage P2 GpU family protein9e-39160
NC_008390:2018201:203723820372382038116879Burkholderia cepacia AMMD chromosome 1, complete sequencephage P2 GpU family protein2e-38159
NC_006576:856014:873361873361874281921Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-29129
NC_007604:743738:746590746590747510921Synechococcus elongatus PCC 7942, complete genomehypothetical protein3e-29129
NC_012881:2310141:232552323255232325903381Desulfovibrio salexigens DSM 2638, complete genomeP2 GpU family protein2e-1892.8
NC_009832:2211154:223880522388052239263459Serratia proteamaculans 568, complete genomeP2 GpU family protein1e-1687
NC_015563:4959843:496628349662834966741459Delftia sp. Cs1-4 chromosome, complete genomeP2 GpU family protein2e-1376.6
NC_011415:2248417:226432222643222264750429Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-1375.5
NC_003902:3544743:354808035480803548481402Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related tail protein2e-1273.6
NC_012416:753500:757164757164757580417Wolbachia sp. wRi, complete genometail protein U, putative2e-1273.2
NC_021150:3771860:378625037862503786693444Azotobacter vinelandii CA6, complete genomePhage P2 GpU protein6e-1271.6
NC_012560:3771861:378625137862513786694444Azotobacter vinelandii DJ, complete genomePhage P2 GpU protein6e-1271.6
NC_007963:1552761:156822515682251568668444Chromohalobacter salexigens DSM 3043, complete genomephage P2 GpU4e-1168.9
NC_014323:961825:978063978063978590528Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage P2 phage-related tail U protein7e-1167.8
NC_009801:995396:101492410149241015403480Escherichia coli E24377A, complete genomephage protein gpU9e-1064.3
NC_008781:3508784:351572135157213516170450Polaromonas naphthalenivorans CJ2, complete genomephage P2 GpU family protein2e-0963.2
NC_007613:1353500:137033413703341370822489Shigella boydii Sb227, complete genomeputative tail protein2e-0859.7
NC_015410:2351464:238451223845122384952441Pseudomonas mendocina NK-01 chromosome, complete genomephage P2 GpU protein2e-0859.7
NC_009648:3803622:380478838047883805267480Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail protein5e-0858.5
NC_010981:1371265:141166214116621412009348Wolbachia pipientis, complete genomephage tail protein GpU7e-0858.2
NC_010981:468465:481791481791482147357Wolbachia pipientis, complete genomephage tail protein GpU7e-0858.2
NC_015856:1182974:118820811882081188765558Collimonas fungivorans Ter331 chromosome, complete genomephage p2 GpU7e-0858.2
NC_002978:549454:552805552805553155351Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage P2W3, tail protein U, putative1e-0757.4
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0756.6
NC_012724:1914740:192413919241391924636498Burkholderia glumae BGR1 chromosome 1, complete genomePhage protein U3e-0755.8
NC_009436:1466580:148955414895541490039486Enterobacter sp. 638, complete genomephage P2 GpU family protein4e-0755.8
NC_020181:5130513:516738451673845167869486Enterobacter aerogenes EA1509E, complete genomePhage-related tail protein4e-0755.8
NC_016816:674171:678437678437678940504Pantoea ananatis LMG 5342, complete genomeP2 GpU family protein6e-0755.1
NC_003198:4453457:447582044758204476305486Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail protein1e-0653.9