Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4921891 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4921891, End: 4923201, Length: 1311

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:5009895500989550113791485Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein0904
NC_016814:18000:3078730787322021416Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceK04069 pyruvate formate lyase activating enzyme1e-115416
NC_000868:696296:7126187126187136641047Pyrococcus abyssi GE5, complete genomepyruvate formate-lyase activating enzyme related protein7e-55214
NC_007517:1107408:1121480112148011224901011Geobacter metallireducens GS-15, complete genomeRadical SAM4e-52205
NC_009092:1047500:1065921106592110670091089Shewanella loihica PV-4, complete genomeRadical SAM domain protein3e-50199
NC_014246:536338:538999538999539883885Mobiluncus curtisii ATCC 43063 chromosome, complete genomeradical SAM domain-containing protein3e-49196
NC_014761:1795304:1802288180228818033611074Oceanithermus profundus DSM 14977 chromosome, complete genomeradical sam domain protein1e-48194
NC_009663:982048:9986849986849996941011Sulfurovum sp. NBC37-1, complete genome[pyruvate formate-lyase]-activating enzyme6e-47188
NC_015435:251958:2525232525232535781056Metallosphaera cuprina Ar-4 chromosome, complete genomeradical SAM domain-containing protein6e-45182
NC_013757:2659930:2659930265993026610301101Geodermatophilus obscurus DSM 43160, complete genomeRadical SAM domain protein5e-45182
NC_014374:1072218:1104055110405511051431089Acidilobus saccharovorans 345-15 chromosome, complete genomepyruvate-formate lyase-activating enzyme, PflA3e-44179
NC_007626:4038054:4044152404415240453601209Magnetospirillum magneticum AMB-1, complete genomePyruvate-formate lyase-activating enzyme2e-43177
NC_014033:675626:675626675626676489864Prevotella ruminicola 23 chromosome, complete genomeradical SAM domain-containing protein2e-43176
NC_009376:1465125:1486127148612714872181092Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeradical SAM domain-containing protein1e-42174
NC_016070:1448488:1452712145271214538391128Thermoproteus tenax Kra 1, complete genomepyruvate formate-lyase activating enzyme1e-41171
NC_015315:1584890:1604927160492716060571131Thermoproteus uzoniensis 768-20 chromosome, complete genomeRadical SAM domain-containing protein2e-41170
NC_014758:579741:583603583603584577975Calditerrivibrio nitroreducens DSM 19672 chromosome, completeradical sam domain protein7e-38158
NC_012034:390273:413363413363414211849Anaerocellum thermophilum DSM 6725, complete genomeRadical SAM domain protein7e-34145
NC_010718:237962:2477092477092487851077Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRadical SAM domain protein2e-33144
NC_017068:1143515:114489311448931145726834Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-31137
NC_014364:2717865:2723648272364827246611014Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRadical SAM domain protein8e-30131
NC_009073:803372:8177868177868188021017Pyrobaculum calidifontis JCM 11548, complete genomeRadical SAM domain protein3e-27123
NC_007498:197810:1978101978101995791770Pelobacter carbinolicus DSM 2380, complete genomepyruvate-formate lyase-activating enzyme3e-24113
NC_008701:1719464:1719464171946417205581095Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-0963.9
NC_014410:51711:749047490475632729Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,pyruvate formate-lyase activating enzyme8e-0962
NC_018750:3315309:332659433265943327406813Streptomyces venezuelae ATCC 10712, complete genomePyruvate formate-lyase activating enzyme1e-0861.6
NC_015555:49842:739707397074698729Thermoanaerobacterium xylanolyticum LX-11 chromosome, completepyruvate formate-lyase activating enzyme2e-0860.8
NC_019970:35985:607916079161519729Thermoanaerobacterium thermosaccharolyticum M0795, complete genomepyruvate formate-lyase 1-activating enzyme4e-0859.7
NC_008618:1206157:122747812274781228356879Bifidobacterium adolescentis ATCC 15703, complete genomepyruvate formate-lyase 1 activating enzyme7e-0858.9
NC_013714:1521404:154305415430541543935882Bifidobacterium dentium Bd1, complete genomepflA1 Pyruvate formate-lyase activating enzyme7e-0858.9
NC_013093:2633000:267457826745782675423846Actinosynnema mirum DSM 43827, complete genomepyruvate formate-lyase activating enzyme5e-0755.8
NC_015275:1223088:124302112430211243746726Clostridium lentocellum DSM 5427 chromosome, complete genomepyruvate formate-lyase activating enzyme6e-0755.8
NC_009801:995396:9998659998651000662798Escherichia coli E24377A, complete genomepyruvate formate-lyase 1-activating enzyme7e-0755.5
NC_014614:2500301:252580225258022526560759Clostridium sticklandii, complete genomepyruvate formate lyase activating enzyme 13e-0653.5
NC_011094:1050700:106119810611981061995798Salmonella enterica subsp. enterica serovar Schwarzengrund strpyruvate formate lyase-activating enzyme 15e-0652.8