Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:4914406:4920286 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4920286, End: 4920606, Length: 321

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:500845950084595008890432Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, MarR family3e-54209
NC_009255:1890112:189450218945021894966465Burkholderia vietnamiensis G4 chromosome 2, complete sequenceAsnC family transcriptional regulator5e-29126
NC_007802:1484641:148963314896331490136504Jannaschia sp. CCS1, complete genometranscriptional regulator, AsnC family3e-1890.5
NC_007802:1991211:201485120148512015372522Jannaschia sp. CCS1, complete genometranscriptional regulator, AsnC family3e-1890.1
NC_003296:1696958:170008917000891700583495Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-1889.7
NC_003296:1665569:166989916698991670393495Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-1889.7
NC_008463:2654014:266935026693502669787438Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator, AsnC family4e-1786.7
NC_020064:1409596:141391714139171414354438Serratia marcescens FGI94, complete genometranscriptional regulator2e-1684.7
NC_016812:4246542:427650442765044276944441Sinorhizobium fredii HH103, complete genomeAsnC family transcriptional regulator1e-1582
NC_004129:4333302:433685343368534337290438Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AsnC family2e-1580.9
NC_005125:2811986:284188628418862842359474Gloeobacter violaceus PCC 7421, complete genomeAsnC family transcriptional regulatory protein1e-1478.2
NC_013947:1956923:196372119637211964218498Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, AsnC family5e-1373.2
NC_003295:2507850:251832125183212518776456Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-1373.2
NC_015566:3417951:344193834419383442381444Serratia sp. AS12 chromosome, complete genomeAsnC family ranscriptional regulator1e-1272
NC_016514:2647984:266650826665082666951444Enterobacter cloacae EcWSU1 chromosome, complete genomeHTH-type transcriptional regulator lrpA3e-1270.5
NC_016111:3659269:366572536657253666180456Streptomyces cattleya NRRL 8057, complete genomeAsnC family transcriptional regulator4e-1270.1
NC_016047:637778:651867651867652310444Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeLrp/AsnC family transcriptional regulator8e-1269.3
NC_015968:2583721:260225026022502602693444Enterobacter asburiae LF7a chromosome, complete genomeAsnC family transcriptional regulator7e-1269.3
NC_015566:4049000:405514040551404055583444Serratia sp. AS12 chromosome, complete genomeAsnC family ranscriptional regulator1e-1168.2
NC_013093:2471574:250243825024382502887450Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, AsnC family2e-1167.8
NC_020209:397376:433701433701434159459Pseudomonas poae RE*1-1-14, complete genomeAsnC family transcriptional regulator2e-1167.4
NC_009953:2727669:275254727525472753035489Salinispora arenicola CNS-205 chromosome, complete genomeAsnC family transcriptional regulator6e-1166.2
NC_014828:1905479:191184819118481912300453Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, AsnC family8e-1165.9
NC_008278:4023918:403589240358924036335444Frankia alni ACN14a, complete genomePutative AsnC-family transcriptional regulator (partial)1e-1065.1
NC_007777:2638580:265272526527252653135411Frankia sp. CcI3, complete genometranscriptional regulator, AsnC family2e-1064.3
NC_009921:4948500:495990449599044960347444Frankia sp. EAN1pec, complete genometranscriptional regulator, AsnC family2e-1064.3
NC_009380:2548878:257029825702982570786489Salinispora tropica CNB-440 chromosome, complete genomeAsnC/Lrp family regulatory protein2e-1064.3
NC_016884:2701217:271093827109382711408471Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeAsnC family transcriptional regulator5e-1063.2
NC_015757:831285:839618839618840088471Sulfobacillus acidophilus TPY chromosome, complete genometranscriptional regulator, AsnC family5e-1063.2
NC_013947:3347174:335765633576563358126471Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, AsnC family5e-1063.2
NC_015953:2681331:268259926825992683072474Streptomyces sp. SirexAA-E chromosome, complete genomeAsnC family transcriptional regulator2e-0961.2
NC_002570:207555:227903227903228343441Bacillus halodurans C-125, complete genometranscriptional regulator (Lrp/AsnC family)2e-0961.2
NC_015434:3507059:350824135082413508738498Verrucosispora maris AB-18-032 chromosome, complete genomeAsnC family transcriptional regulator2e-0961.2
NC_013037:6209424:621759962175996218069471Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AsnC family5e-0959.7
NC_010162:7899980:791947979194797920063585Sorangium cellulosum 'So ce 56', complete genomeleucine responsive regulatory protein9e-0958.9
NC_017506:1:649206492065507588Marinobacter adhaerens HP15 chromosome, complete genomeAsnC family transcriptional regulator1e-0858.5
NC_009953:2727669:273397827339782734484507Salinispora arenicola CNS-205 chromosome, complete genomeAsnC family transcriptional regulator2e-0858.2
NC_015638:1824794:184727818472781847751474Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeAsnC family transcriptional regulator2e-0857.8
NC_013169:1058463:107853310785331079030498Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, AsnC family2e-0857.8
NC_014623:3503218:350442935044293504896468Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeAsnC family transcriptional regulator2e-0857.8
NC_018581:3646489:365956636595663660057492Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator3e-0857.4
NC_015160:231276:233935233935234405471Odoribacter splanchnicus DSM 20712 chromosome, complete genometranscriptional regulator, AsnC family3e-0857
NC_009380:2548878:255407225540722554569498Salinispora tropica CNB-440 chromosome, complete genomeAsnC/Lrp family regulatory protein4e-0857
NC_014165:2081914:209494820949482095496549Thermobispora bispora DSM 43833 chromosome, complete genomeAsnC family transcriptional regulator6e-0856.2
NC_015379:3570658:358424935842493584749501Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcriptional regulatory protein6e-0856.2
NC_012214:1:6346341095462Erwinia pyrifoliae Ep1/96, complete genomeAsnC-family transcriptional regulator6e-0856.2
NC_008061:2153495:218083421808342181436603Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AsnC family7e-0855.8
NC_010694:1:6556551116462Erwinia tasmaniensis, complete genomeAsnC-family transcriptional regulator8e-0855.8
NC_013887:1402980:141868614186861419108423Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator, AsnC family1e-0755.1
NC_015311:1101761:112163111216311122140510Prevotella denticola F0289 chromosome, complete genomeAsnC family transcriptional regulator2e-0754.3
NC_013222:2595315:261182026118202612299480Robiginitalea biformata HTCC2501, complete genomeprobable transcriptional regulator3e-0753.9
NC_014151:813755:846091846091846561471Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, AsnC family3e-0753.9
NC_015376:3320818:335632633563263356808483Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AsnC family protein3e-0753.5
NC_014121:4299500:430084243008424301294453Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-0753.5
NC_008541:1042322:104410010441001044603504Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, AsnC family4e-0753.1
NC_013156:980888:998757998757999179423Methanocaldococcus fervens AG86, complete genometranscriptional regulator, AsnC family5e-0753.1
NC_015474:1432065:145348714534871454026540Pyrococcus sp. NA2 chromosome, complete genomeputative protein AsnC family transcriptional regulator6e-0753.1
NC_009089:3889811:392102439210243921485462Clostridium difficile 630, complete genomeAsnC-family transcriptional regulator7e-0752.8
NC_003295:2507850:252033025203302520593264Ralstonia solanacearum GMI1000, complete genomehypothetical protein7e-0752.8
NC_017059:2771085:279869727986972799185489Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator1e-0652
NC_011886:1176238:118064211806421181145504Arthrobacter chlorophenolicus A6, complete genometranscriptional regulator, AsnC family1e-0652
NC_012522:7871173:788457178845717885056486Rhodococcus opacus B4, complete genomeputative AsnC family transcriptional regulator2e-0651.2
NC_010995:20181:455864558646134549Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AsnC family2e-0651.2
NC_016947:1455744:147807014780701478570501Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAsnC family transcriptional regulator3e-0650.4
NC_009480:703102:716740716740717177438Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative transcriptional regulator, AsnC family4e-0650.4
NC_003909:927955:942926942926943420495Bacillus cereus ATCC 10987, complete genometranscriptional regulator, AsnC family4e-0650.1
NC_013947:1011899:101189910118991012345447Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-0650.1
NC_004337:3590323:393381339338133934271459Shigella flexneri 2a str. 301, complete genomeregulator for asnA, asnC and gidA4e-0650.1