Pre_GI Gene

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Host: NC_009480 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009480:703102 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7017927031051314putative metalloendopeptidase family M1QuickGO ontologyBLASTP
7031027073044203non-ribosomal peptide synthaseQuickGO ontologyBLASTP
707376707744369hypothetical proteinBLASTP
707868708239372hypothetical protein
7094467161026657hypothetical proteinBLASTP
716740717177438putative transcriptional regulator AsnC familyQuickGO ontologyBLASTP
717361718203843hypothetical proteinBLASTP
7182427194861245putative ornithine aminotransferaseQuickGO ontologyBLASTP
719607720104498hypothetical proteinBLASTP
720135720782648hypothetical proteinBLASTP
720800721792993putative permease DMT familyQuickGO ontologyBLASTP
721857722258402hypothetical protein
722346723230885putative NDP-sugar epimeraseQuickGO ontologyBLASTP
723227723643417hypothetical protein
7236407248751236putative benzoate transport protein BenE familyQuickGO ontologyBLASTP
7251367263951260putative membrane metalloendopeptidasesubfamily M23BQuickGO ontologyBLASTP
726453727175723hypothetical proteinBLASTP