Pre_GI: BLASTP Hits

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Query: NC_016830:1719407:1738809 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1738809, End: 1739645, Length: 837

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:1741816:176479017647901765641852Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-152537
NC_021150:1677811:167781116778111678680870Azotobacter vinelandii CA6, complete genomeRNA binding protein, S1 family2e-111402
NC_012560:1677798:167779816777981678667870Azotobacter vinelandii DJ, complete genomeRNA binding protein, S1 family2e-111402
NC_014933:364463:367998367998368834837Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein1e-72273
NC_008322:1898000:191664119166411917480840Shewanella sp. MR-7, complete genomehypothetical protein6e-71267
NC_016602:2037162:203875920387592039595837Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA binding S1 domain-containing protein8e-71266
NC_010334:2131939:215396821539682154801834Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein1e-66253
NC_016026:1969766:199627519962751997147873Micavibrio aeruginosavorus ARL-13 chromosome, complete genome3-deoxy-7-phosphoheptulonate synthase4e-65248
NC_013730:2187898:218899421889942189845852Spirosoma linguale DSM 74, complete genomehypothetical protein3e-62238
NC_013173:1712138:171597117159711716801831Desulfomicrobium baculatum DSM 4028, complete genomenucleic acid binding protein1e-60233
NC_006138:225832:250352250352251182831Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-58226
NC_014935:595685:598865598865599782918Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein7e-57220
NC_015496:2436089:243608924360892436922834Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomehypothetical protein6e-56217
NC_019978:2071435:207728220772822078109828Halobacteroides halobius DSM 5150, complete genomehypothetical protein1e-53210
NC_017045:328031:342940342940343764825Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein1e-44179
NC_014738:167707:182616182616183440825Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein1e-44179
NC_020125:1545578:154940715494071550231825Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein1e-44179
NC_007498:3085511:310167931016793102503825Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein8e-44177
NC_008261:2117207:213887821388782139720843Clostridium perfringens ATCC 13124, complete genomehypothetical protein1e-40166
NC_003366:1901898:192356519235651924407843Clostridium perfringens str. 13, complete genomehypothetical protein6e-40164
NC_008262:1795914:181292718129271813769843Clostridium perfringens SM101, complete genomehypothetical protein1e-39163
NC_014633:655693:671347671347672186840Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceRNA binding S1 domain-containing protein8e-37154
NC_015873:2260048:227737622773762278287912Megasphaera elsdenii DSM 20460, complete genomehypothetical protein6e-29127
NC_011725:1182000:118332311833231184177855Bacillus cereus B4264 chromosome, complete genomehypothetical protein1e-23110
NC_010163:285710:304481304481305332852Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein8e-1787.8
NC_015678:966000:969278969278970132855Streptococcus parasanguinis ATCC 15912 chromosome, complete genomes1 RNA binding domain-containing protein3e-1065.9