Pre_GI: BLASTP Hits

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Query: NC_016810:1358456:1366411 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 1366411, End: 1366617, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1359769:136772413677241367930207Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-32138
NC_016856:1411579:141953414195341419740207Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-32138
NC_011147:1573470:158425715842571584463207Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-32138
NC_006511:1579776:158907615890761589282207Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-32138
NC_003198:1693623:170292317029231703129207Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-32135
NC_004631:1271500:127800112780011278207207Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-32135