Pre_GI: BLASTP Hits

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Query: NC_016768:830000:851544 Mycobacterium tuberculosis KZN 4207 chromosome, complete genome

Start: 851544, End: 851729, Length: 186

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:829444:850851850851851036186Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein2e-27121
NC_012943:830000:851540851540851725186Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransposase2e-27121
NC_012207:831030:852485852485852670186Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transposase2e-27121
NC_002945:831029:852532852532852717186Mycobacterium bovis AF2122/97, complete genometransposase2e-27121
NC_002944:865425:8727728727728739591188Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-2097.1
NC_008726:610000:6138536138536156461794Mycobacterium vanbaalenii PYR-1, complete genomeIntegrase, catalytic region1e-0755.1
NC_003155:4592000:4623466462346646252351770Streptomyces avermitilis MA-4680, complete genomeISmav2-like transposase2e-0754.3
NC_013235:1761539:1766259176625917680821824Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region1e-0548.9