Pre_GI: BLASTP Hits

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Query: NC_016445:338288:348318 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 348318, End: 348785, Length: 468

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:882931:892961892961893440480Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative transcriptional regulator9e-77285
NC_012578:818241:828271828271828750480Vibrio cholerae M66-2 chromosome I, complete sequenceputative transcriptional regulator9e-77285
NC_009457:351512:361542361542362021480Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator9e-77285
NC_002505:860789:870819870819871298480Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, putative9e-77285
NC_016944:859492:867838867838868305468Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-76285
NC_012668:2744393:279251827925182792985468Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-76285
NC_004459:349500:393267393267393737471Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator2e-66251
NC_005139:796546:801777801777802259483Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator8e-65245
NC_009053:1895485:190518919051891905518330Actinobacillus pleuropneumoniae L20, complete genomeputative transcriptional regulator1e-1995.5
NC_004347:3303957:330536033053603305740381Shewanella oneidensis MR-1, complete genometranscriptional regulator, Cro/CI family1e-1375.5
NC_016816:1676460:170624717062471706582336Pantoea ananatis LMG 5342, complete genomeputative transcriptional regulator2e-1374.7
NC_013956:2749685:275249327524932752828336Pantoea ananatis LMG 20103 chromosome, complete genomeYcjC2e-1374.3
NC_014973:243000:249656249656249958303Geobacter sp. M18 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0753.1