Pre_GI: BLASTP Hits

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Query: NC_016445:2938887:2943453 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2943453, End: 2944532, Length: 1080

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:514742:5193085193085203871080Vibrio cholerae IEC224 chromosome I, complete sequenceextracellular solute-binding protein0742
NC_012668:83641:99962999621010411080Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP transporter solute receptor0742
NC_002505:514732:5192985192985203771080Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeextracellular solute-binding protein, putative0742
NC_015497:2859724:2874240287424028753161077Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeExtracellular solute-binding protein, family 74e-129461
NC_017192:88940:8894088940900041065Arcobacter sp. L, complete genomeTRAP dicarboxylate ABC transporter substrate binding component1e-126453
NC_010506:4404377:4414103441410344151971095Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-74280
NC_013166:194614:1954691954691965841116Kangiella koreensis DSM 16069, complete genomeTRAP dicarboxylate transporter- DctP subunit5e-65248
NC_008312:6801445:6815319681531968164251107Trichodesmium erythraeum IMS101, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-62239
NC_008312:6801445:6816642681664268177271086Trichodesmium erythraeum IMS101, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-55216
NC_008820:2512518:2512518251251825136421125Prochlorococcus marinus str. MIT 9303, complete genomepossible Tripartite transporter component (TRAP-T family), substrate binding protein2e-54213
NC_014153:2282725:2304953230495323060381086Thiomonas intermedia K12 chromosome, complete genomeExtracellular solute-binding protein, family 71e-53210
NC_014153:2282725:2306173230617323072551083Thiomonas intermedia K12 chromosome, complete genomeExtracellular solute-binding protein, family 73e-50199
NC_014758:1387470:1408979140897914100461068Calditerrivibrio nitroreducens DSM 19672 chromosome, completeextracellular solute-binding protein, family 71e-37157
NC_018643:1309804:1333127133312713342871161Alpha proteobacterium HIMB5 chromosome, complete genomeBacterial ABC superfamily ATP binding cassette transporter, binding protein, family 72e-28127
NC_016745:546249:555875555875556750876Oceanimonas sp. GK1 chromosome, complete genomeTRAP transporter DctP family protein9e-24111
NC_007645:3688000:3688251368825136892671017Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, periplasmic component1e-23111
NC_014011:472650:4898554898554909221068Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 75e-1995.5
NC_006569:370846:3762033762033772221020Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceTRAP dicarboxylate family transporter, DctP subunit5e-1892.4
NC_014364:4488875:4510905451090545119091005Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit4e-1479.3
NC_019903:2578966:2578966257896625800991134Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component6e-1479
NC_007963:2777066:2792565279256527936471083Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-1273.9
NC_007969:1076287:1077587107758710786391053Psychrobacter cryohalolentis K5, complete genomeTRAP dicarboxylate transporter- DctP subunit6e-1168.9
NC_007509:1043602:104900310490031049989987Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter- DctP subunit6e-1065.5
NC_016642:1990684:200975720097572010731975Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP9e-1065.1
NC_009439:4404942:4427124442712444281251002Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-0963.2
NC_013740:2218215:2228533222853322295461014Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctP subunit9e-0961.6
NC_020911:18500:362213622137201981Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP2e-0860.1
NC_008392:666000:683207683207684193987Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctP subunit2e-0860.1
NC_018581:759932:7701847701847713741191Gordonia sp. KTR9 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system, periplasmic component7e-0858.5
NC_015573:813000:8433328433328443841053Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomefamily 7 extracellular solute-binding protein1e-0757.8
NC_014966:1668822:169116016911601692143984Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTRAP-type C4-dicarboxylate transporter periplasmic protein3e-0756.6
NC_007963:317291:3172913172913183551065Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit4e-0755.8
NC_016629:3789554:3828241382824138292871047Desulfovibrio africanus str. Walvis Bay chromosome, completeextracellular solute-binding protein5e-0755.8
NC_007963:2777066:2785741278574127867511011Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit7e-0755.1
NC_016513:1761830:176842317684231769415993Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDctP protein8e-0755.1
NC_015914:2230076:225379622537962254788993Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-0653.9
NC_008254:3143770:3155453315545331565411089Mesorhizobium sp. BNC1, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-0653.9
NC_015565:1511426:1528392152839215294141023Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctP7e-0652