Pre_GI: BLASTP Hits

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Query: NC_015975:1056731:1078020 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 1078020, End: 1078571, Length: 552

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:845000:862188862188862718531Lactobacillus rhamnosus Lc 705, complete genomeprophage protein, HNH homing endonuclease family7e-1476.6
NC_008571:2553849:256822325682232569161939Gramella forsetii KT0803, complete genomeHNH endonuclease family protein2e-1168.6
NC_015975:923812:941907941907942476570Lactobacillus ruminis ATCC 27782 chromosome, complete genomeputative HNH endonuclease, phage-like protein2e-1065.5
NC_013198:1095591:112205511220551122597543Lactobacillus rhamnosus GG, complete genomeprophage protein, HNH endodeoxyribonuclease family (HNH homing endonuclease I-HmuI)4e-1064.3
NC_016052:1839763:185041518504151850951537Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein5e-1063.9
NC_014973:3452100:346695034669503467465516Geobacter sp. M18 chromosome, complete genomeHNH endonuclease4e-0961.2
NC_013364:2612822:262864126286412629174534Escherichia coli O111:H- str. 11128, complete genomeputative endodeoxyribonuclease5e-0960.8
NC_009782:920272:927128927128927679552Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein2e-0858.5
NC_002758:918827:925683925683926234552Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-0858.5
NC_012121:474144:481699481699482250552Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative HNH-family endonuclease, phage associated2e-0858.5
NC_008530:646207:656615656615657346732Lactobacillus gasseri ATCC 33323, complete genomeHoming nuclease of HNH family with NUMOD4 and IENR domains3e-0754.7
NC_009633:4097536:410602841060284106537510Alkaliphilus metalliredigens QYMF chromosome, complete genomeNUMOD4 domain-containing protein4e-0754.3
NC_014724:1101950:111980611198061120336531Lactobacillus amylovorus GRL 1112 chromosome, complete genomehoming nuclease5e-0753.9
NC_011660:2924397:293911529391152939657543Listeria monocytogenes HCC23 chromosome, complete genomeHNH endonuclease family protein2e-0652
NC_011898:3367457:341006734100673410594528Clostridium cellulolyticum H10, complete genomeHNH endonuclease7e-0650.4