Pre_GI: BLASTP Hits

Some Help

Query: NC_015947:3539472:3545258 Burkholderia sp. JV3 chromosome, complete genome

Start: 3545258, End: 3545671, Length: 414

Host Lineage: Stenotrophomonas maltophilia; Stenotrophomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Environment: Rhizosphere, Host, Rhizosphere-colonizing; Temp: Mesophile. This species is an uncommon but serious source of infection in patients with breathing tubes such as endotracheal or tracheostomy tubes, or with chronically indwelling urinary catheters. Although the organism can colonize the devices without causing an infection, under certain conditions it can cause pneumonia, urinary tract infections, or an infection of the blood. This organism can also cause infection in immunocompromised patients. It has resistance to many commonly used antibiotics and therefore is often difficult to eradicate. Most strains are resistant to co-trimoxazole.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003919:3812778:381961038196103820050441Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrillin1e-23108
NC_015947:3539472:354474735447473545154408Burkholderia sp. JV3 chromosome, complete genomefimbrial protein pilin9e-22102
NC_011071:3544450:355886335588633559276414Stenotrophomonas maltophilia R551-3, complete genomeFimbrial protein pilin2e-21100
NC_015733:715947:718863718863719273411Pseudomonas putida S16 chromosome, complete genomefimbrial protein pilin1e-1995.1
NC_002947:737924:740841740841741251411Pseudomonas putida KT2440, complete genometype IV pili prepilin PilA2e-1994.4
NC_011071:3544450:355836335583633558767405Stenotrophomonas maltophilia R551-3, complete genomeFimbrial protein pilin2e-1994
NC_009512:755658:760182760182760592411Pseudomonas putida F1, complete genomeFimbrial protein pilin5e-1993.2
NC_017986:3407913:341311834131183413528411Pseudomonas putida ND6 chromosome, complete genomefimbrial protein pilin5e-1993.2
NC_003919:3812778:381904538190453819485441Xanthomonas axonopodis pv. citri str. 306, complete genomefimbrillin6e-1992.8
NC_010501:4989455:500772050077205008130411Pseudomonas putida W619, complete genomeFimbrial protein pilin1e-1891.7
NC_010322:768849:773584773584773994411Pseudomonas putida GB-1 chromosome, complete genomefimbrial protein pilin1e-1478.2
NC_008027:4953432:496809449680944968504411Pseudomonas entomophila L48, complete genometype IV pili prepilin PilA2e-1477.8
NC_008340:277223:284503284503285000498Alkalilimnicola ehrlichei MLHE-1, complete genomeFimbrial protein pilin8e-1475.9
NC_003902:3666544:367389136738913674331441Xanthomonas campestris pv. campestris str. ATCC 33913, completepilin2e-0857.8
NC_007086:1224867:127404712740471274487441Xanthomonas campestris pv. campestris str. 8004, complete genomepilin2e-0857.8
NC_006834:1602994:162396516239651624471507Xanthomonas oryzae pv. oryzae KACC10331, complete genomepilin4e-0753.5
NC_009656:5297000:530881553088155309354540Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilin structural subunit5e-0753.1
NC_010717:1469911:148991414899141490339426Xanthomonas oryzae pv. oryzae PXO99A, complete genomepilin5e-0753.1
NC_007705:1583373:160621716062171606642426Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomepilin5e-0753.1
NC_017267:3612682:361831136183113618736426Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completepilin1e-0652.4
NC_012791:2590500:260234226023422602830489Variovorax paradoxus S110 chromosome 1, complete genomeFimbrial protein pilin1e-0652
NC_020541:1014176:103127510312751031715441Rhodanobacter sp. 2APBS1, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-0651.6
NC_007973:499606:501865501865502413549Ralstonia metallidurans CH34 chromosome 1, complete sequenceFimbrial protein pilin3e-0650.4
NC_007645:5397526:541911254191125419585474Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein, major pilin PilA1e-0548.9