Pre_GI: BLASTP Hits

Some Help

Query: NC_015761:4355335:4376858 Salmonella bongori NCTC 12419, complete genome

Start: 4376858, End: 4377388, Length: 531

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:4460726:450007645000764500606531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-79294
NC_012125:4716000:474863547486354749081447Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein8e-67252
NC_016832:3100683:312095731209573121442486Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-28123
NC_004631:3112043:313231731323173132802486Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-28123
NC_003198:3126548:314682231468223147307486Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-28123
NC_011147:3075186:309547230954723095957486Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-27122
NC_006511:3079512:309979830997983100283486Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-27122
NC_011149:3187022:320725532072553207740486Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein9e-27119
NC_014323:4619344:463245546324554632946492Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-0857.4