Pre_GI: BLASTP Hits

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Query: NC_015761:3698520:3717575 Salmonella bongori NCTC 12419, complete genome

Start: 3717575, End: 3718615, Length: 1041

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3789696:3809074380907438101141041Salmonella enterica subsp. enterica serovar Paratyphi A strTMAO reductase system periplasmic protein TorT9e-173606
NC_006511:3794017:3813395381339538144351041Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCSolute binding receptor protein9e-173606
NC_011083:4020000:4039539403953940405791041Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tmao reductase system periplasmic protein tort3e-172604
NC_011080:3976441:3995915399591539969551041Salmonella enterica subsp. enterica serovar Newport str. SL254,tmao reductase system periplasmic protein tort3e-172604
NC_011094:3887648:3907122390712239081621041Salmonella enterica subsp. enterica serovar Schwarzengrund strTMAO reductase system periplasmic protein TorT4e-172604
NC_011149:3930358:3949824394982439508641041Salmonella enterica subsp. enterica serovar Agona str. SL483,tmao reductase system periplasmic protein tort6e-172603
NC_011205:4038884:4058378405837840594181041Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853TMAO reductase system periplasmic protein TorT3e-171601
NC_011294:3880500:3899988389998839010281041Salmonella enterica subsp. enterica serovar Enteritidis strTMAO reductase system periplasmic protein TorT7e-169593
NC_010102:3955479:3974224397422439752641041Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-169593
NC_003197:4005857:4025332402533240263721041Salmonella typhimurium LT2, complete genomeperiplasmic sensor4e-168590
NC_016810:4027170:4046645404664540476851041Salmonella enterica subsp. enterica serovar Typhimurium strSolute binding receptor protein4e-168590
NC_016856:4019549:4039024403902440400641041Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Speriplasmic sensory protein associated with the TorRS two-component regulatory system4e-168590
NC_016857:4025767:4046646404664640476861041Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74periplasmic sensory protein associated with the TorRS two-component regulatory system4e-168590
NC_016860:4110968:4130443413044341314831041Salmonella enterica subsp. enterica serovar Typhimurium strTMAO reductase system periplasmic protein TorT4e-168590
NC_016863:3967156:3986631398663139876711041Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1TMAO reductase system periplasmic protein TorT4e-168590
NC_016831:3779611:378242537824253783357933Salmonella enterica subsp. enterica serovar Gallinarum/pullorum9e-139493
NC_011601:1077548:1089018108901810900461029Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeTMAO reductase system periplasmic protein TorT3e-123441
NC_012779:305969:3059693059693070031035Edwardsiella ictaluri 93-146, complete genometmao reductase system periplasmic protein tort, putative2e-111402
NC_017046:4025998:404579940457994046521723Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein6e-110397
NC_017046:4025998:404547340454734045784312Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein3e-51202
NC_011894:3319856:3346379334637933474491071Methylobacterium nodulans ORS 2060, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-44180
NC_011662:2320100:2320100232010023211731074Thauera sp. MZ1T, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-38159
NC_009952:2381601:240851724085172409482966Dinoroseobacter shibae DFL 12, complete genomeperiplasmic binding protein5e-31135