Pre_GI: BLASTP Hits

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Query: NC_015571:722815:727096 Porphyromonas gingivalis TDC60, complete genome

Start: 727096, End: 727530, Length: 435

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016776:3691453:369396736939673694398432Bacteroides fragilis 638R, complete genomeputative biotin carboxyl carrier protein5e-37152
NC_003228:3645426:364847036484703648901432Bacteroides fragilis NCTC 9343, complete genomeputative biotin carboxyl carrier protein5e-37152
NC_006347:3735887:374080737408073741238432Bacteroides fragilis YCH46, complete genomebiotin carboxyl carrier protein5e-37152
NC_015164:3431279:345416534541653454593429Bacteroides salanitronis DSM 18170 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein2e-33140
NC_011565:750168:764354764354764770417Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative methylmalonyl-CoA decarboxylase gamma subunit4e-32136
NC_019968:8397:269352693527366432Prevotella dentalis DSM 3688 chromosome 2, complete sequenceacetyl/propionyl-CoA carboxylase, alpha subunit8e-1475.5
NC_003454:822804:826263826263826667405Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBiotin carboxyl carrier protein of glutaconyl-COA decarboxylase2e-1271.6
NC_019942:987134:105792110579211058301381Aciduliprofundum sp. MAR08-339, complete genomeacetyl/propionyl-CoA carboxylase, alpha subunit2e-1168.2
NC_012225:2333500:234857123485712348969399Brachyspira hyodysenteriae WA1, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit4e-1166.6
NC_014759:3572500:357391735739173574417501Marivirga tractuosa DSM 4126 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein5e-1166.2
NC_019908:2068631:210725421072542107673420Brachyspira pilosicoli P43/6/78 chromosome, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit6e-1166.2
NC_016627:1723104:172310417231041723502399Clostridium clariflavum DSM 19732 chromosome, complete genomebiotin carboxyl carrier protein6e-1166.2
NC_010320:819326:833187833187833585399Thermoanaerobacter sp. X514 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein5e-1063.2
NC_015958:2361551:236578923657892366187399Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein5e-1063.2
NC_000868:834872:853742853742854179438Pyrococcus abyssi GE5, complete genomemethylmalonyl-CoA decarboxylase gamma chain1e-0962
NC_015555:277364:284799284799285179381Thermoanaerobacterium xylanolyticum LX-11 chromosome, completebiotin/lipoyl attachment domain-containing protein1e-0961.6
NC_007626:697926:7234237234237254201998Magnetospirillum magneticum AMB-1, complete genomeAcetyl-/propionyl-coenzyme A carboxylase alpha chain1e-0961.6
NC_020134:1173000:119218211921821192604423Clostridium stercorarium subsp. stercorarium DSM 8532, completebiotin/lipoyl attachment domain-containing protein2e-0961.2
NC_010003:605961:609336609336609806471Petrotoga mobilis SJ95, complete genomebiotin/lipoyl attachment domain-containing protein3e-0960.8
NC_009718:1411793:142557614255761426019444Fervidobacterium nodosum Rt17-B1, complete genomebiotin/lipoyl attachment domain-containing protein3e-0960.5
NC_014632:336000:346373346373346768396Ilyobacter polytropus DSM 2926 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein4e-0960.1
NC_017059:376226:3867863867863887741989Rhodospirillum photometricum DSM 122, complete genomebiotin carboxylase6e-0959.7
NC_004129:3452885:3491568349156834948403273Pseudomonas fluorescens Pf-5, complete genomebiotin carboxylase1e-0858.9
NC_007802:1093785:1108199110819911102022004Jannaschia sp. CCS1, complete genomeCarbamoyl-phosphate synthase L chain, ATP-binding2e-0857.8
NC_013410:1953293:195418119541811954543363Fibrobacter succinogenes subsp. succinogenes S85 chromosome,biotin/lipoyl attachment domain-containing protein2e-0857.8
NC_011978:1812000:182403118240311824444414Thermotoga neapolitana DSM 4359, complete genomeBiotin/lipoyl attachment domain-containing protein2e-0857.4
NC_008609:1394377:1411949141194914153953447Pelobacter propionicus DSM 2379, complete genomepyruvate carboxylase3e-0857.4
NC_011992:1968258:1973483197348319755312049Acidovorax ebreus TPSY, complete genomeCarbamoyl-phosphate synthase L chain ATP-binding4e-0857
NC_014933:3637172:3653556365355636553881833Bacteroides helcogenes P 36-108 chromosome, complete genomePyruvate carboxylase4e-0857
NC_013440:9146562:916723091672309167739510Haliangium ochraceum DSM 14365, complete genomebiotin/lipoyl attachment domain-containing protein5e-0856.6
NC_015437:572788:576562576562576948387Selenomonas sputigena ATCC 35185 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein4e-0856.6
NC_012560:201237:2012372012372030361800Azotobacter vinelandii DJ, complete genomepyruvate carboxylase subunit B4e-0856.6
NC_021150:201237:2012372012372030361800Azotobacter vinelandii CA6, complete genomepyruvate carboxylase subunit B4e-0856.6
NC_014758:579741:589985589985590518534Calditerrivibrio nitroreducens DSM 19672 chromosome, completebiotin carboxyl carrier protein7e-0855.8
NC_019964:1873167:1894081189408118959191839Halovivax ruber XH-70, complete genomeacetyl/propionyl-CoA carboxylase, alpha subunit9e-0855.8
NC_015576:3976679:3976679397667939786521974Mycobacterium sp. JDM601 chromosome, complete genomeacetyl-/propionyl-coenzyme A carboxylase subunit alpha AccA19e-0855.5
NC_013642:505518:514444514444514842399Thermotoga naphthophila RKU-10, complete genomebiotin/lipoyl attachment domain-containing protein2e-0754.3
NC_008786:2729635:2729635272963527316622028Verminephrobacter eiseniae EF01-2, complete genomeCarbamoyl-phosphate synthase L chain, ATP-binding3e-0753.9
NC_015873:1193843:121205912120591212466408Megasphaera elsdenii DSM 20460, complete genomeputative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit3e-0753.9
NC_014814:4326500:4348549434854943503481800Mycobacterium sp. Spyr1 chromosome, complete genomeacetyl/propionyl-CoA carboxylase, alpha subunit4e-0753.5
NC_014633:837588:866130866130866525396Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencebiotin/lipoyl attachment domain-containing protein4e-0753.5
NC_010617:1910388:1922977192297719247881812Kocuria rhizophila DC2201, complete genomeacyl-CoA carboxylase alpha chain8e-0752.4
NC_008269:868000:8878958878958896761782Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencebiotin carboxylase8e-0752.4
NC_021171:1689518:169832816983281698540213Bacillus sp. 1NLA3E, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit8e-0752.4
NC_008260:2142311:2165432216543221690193588Alcanivorax borkumensis SK2, complete genomeurea carboxylase/allophanate hydrolase9e-0752.4
NC_007963:2555012:257289025728902573354465Chromohalobacter salexigens DSM 3043, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0652
NC_015164:890955:895319895319895840522Bacteroides salanitronis DSM 18170 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein1e-0652
NC_008553:1858558:1877509187750918792121704Methanosaeta thermophila PT, complete genomeoxaloacetate decarboxylase alpha subunit1e-0652
NC_006347:4031000:403730040373004037800501Bacteroides fragilis YCH46, complete genomeputative methylmalonyl-CoA decarboxylase biotin carboxyl carrier subunit1e-0652
NC_003228:3934770:394105539410553941555501Bacteroides fragilis NCTC 9343, complete genomeputative bioin-requiring protein1e-0652
NC_016776:3973428:397971339797133980213501Bacteroides fragilis 638R, complete genomeputative bioin-requiring protein1e-0652
NC_007333:1411050:1430641143064114324101770Thermobifida fusca YX, complete genomeputative acyl-CoA carboxylase complex A subunit1e-0651.6
NC_004668:3184319:321093432109343211335402Enterococcus faecalis V583, complete genomeacetyl-CoA carboxylase2e-0651.2
NC_013132:1689172:169649116964911696991501Chitinophaga pinensis DSM 2588, complete genomebiotin/lipoyl attachment domain-containing protein2e-0651.2
NC_016620:3259749:326867132686713269183513Bacteriovorax marinus SJ, complete genomeputative biotin-requiring protein3e-0650.8
NC_014002:631649:6500216500216517511731Methanohalophilus mahii DSM 5219 chromosome, complete genomepyruvate carboxylase subunit B4e-0650.1
NC_011146:382719:413264413264413707444Geobacter bemidjiensis Bem, complete genomebiotin/lipoyl attachment domain-containing protein4e-0650.1
NC_014926:1483974:1498947149894715008031857Thermovibrio ammonificans HB-1 chromosome, complete genomeoxaloacetate decarboxylase alpha subunit5e-0649.7
NC_007798:703922:7250447250447270021959Neorickettsia sennetsu str. Miyayama, complete genomepropionyl-CoA carboxylase, alpha subunit6e-0649.7
NC_014034:995661:9967519967519987361986Rhodobacter capsulatus SB1003 chromosome, complete genomepropionyl-CoA carboxylase subunit alpha7e-0649.3
NC_018000:1877183:1877183187718318788921710Sinorhizobium fredii USDA 257 chromosome, complete genomeacetyl/propionyl-CoA carboxylase subunit alpha8e-0649.3
NC_008313:2142397:2145269214526921472842016Ralstonia eutropha H16 chromosome 1, complete sequenceAcetyl/propionyl-CoA carboxylase, alpha subunit8e-0649.3
NC_011126:1345984:1353258135325813551741917Hydrogenobaculum sp. Y04AAS1, complete genomeOxaloacetate decarboxylase9e-0648.9
NC_015557:1333158:1343290134329013452061917Hydrogenobaculum sp. 3684 chromosome, complete genomePyruvate carboxylase1e-0548.9
NC_020411:1333352:1343484134348413454001917Hydrogenobaculum sp. HO, complete genomeConserved carboxylase region1e-0548.9