Pre_GI Gene

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Host: NC_013410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013410:1953293 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19532931954132840hypothetical protein
19541811954543363biotinlipoyl attachment domain-containing proteinQuickGO ontologyBLASTP
195455819557181161sodium ion-translocating decarboxylase subunit betaQuickGO ontologyBLASTP
19559251956788864hypothetical proteinBLASTP
195679719591812385hypothetical proteinBLASTP
19593491960272924hypothetical proteinBLASTP
196026919624822214hypothetical proteinBLASTP
196249519646302136hypothetical proteinBLASTP
196464319666401998hypothetical proteinBLASTP
196666919677871119ATPaseQuickGO ontologyBLASTP
19679791968851873hypothetical proteinBLASTP
196886319709562094hypothetical proteinBLASTP
197098219734232442hypothetical proteinBLASTP
19736231974495873hypothetical proteinBLASTP
197447619765602085hypothetical proteinBLASTP
197672619783151590hypothetical proteinBLASTP