Pre_GI: BLASTP Hits

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Query: NC_015571:2044000:2089976 Porphyromonas gingivalis TDC60, complete genome

Start: 2089976, End: 2091268, Length: 1293

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010655:373437:3824743824743837691296Akkermansia muciniphila ATCC BAA-835, complete genomehypothetical protein0830
NC_016633:1353458:1364246136424613655441299Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA methylase1e-98360
NC_012914:336750:3483593483593496691311Paenibacillus sp. JDR-2, complete genomehypothetical protein1e-83310
NC_020272:3706722:3715569371556937166151047Bacillus amyloliquefaciens IT-45, complete genomeDNA methylase8e-74277
NC_007973:3065632:3076276307627630777001425Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein1e-46187
NC_012125:4716000:4731807473180747330781272Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-41171
NC_006905:4638707:4654491465449146557621272Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein9e-42171
NC_014844:2721746:2738600273860027398621263Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-38161
NC_009952:1984955:1999930199993020013781449Dinoroseobacter shibae DFL 12, complete genomeputative modification methylase1e-32141
NC_010943:1884695:1892783189278318942911509Stenotrophomonas maltophilia K279a, complete genomeputative modification methylase3e-29129
NC_005835:1773482:1786343178634317875751233Thermus thermophilus HB27, complete genomehypothetical protein2e-24113
NC_015573:2463123:2474839247483924761161278Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-24112
NC_009952:1984955:2001559200155920026201062Dinoroseobacter shibae DFL 12, complete genomeputative modification methylase8e-1582
NC_012804:141914:1532251532251546221398Thermococcus gammatolerans EJ3, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)5e-1479.3
NC_006087:237500:2500832500832513061224Leifsonia xyli subsp. xyli str. CTCB07, complete genomeDNA methyltransferase8e-1478.6
NC_013037:1072266:1087955108795510891931239Dyadobacter fermentans DSM 18053, complete genomeadenine-specific DNA methylase2e-1170.5
NC_013890:1142500:1153526115352611547821257Dehalococcoides sp. GT chromosome, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)2e-1067.8
NC_013552:1187299:1199281119928112005371257Dehalococcoides sp. VS, complete genomeadenine-specific DNA methylase1e-1067.8
NC_020387:1257163:1268633126863312698891257Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase1e-1067.8
NC_014931:3642779:3649946364994636513491404Variovorax paradoxus EPS chromosome, complete genomeDNA methylase N-4/N-6 domain protein4e-1066.2
NC_012030:345837:3556403556403570011362Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeadenine-specific DNA methylase4e-0963.2
NC_016026:296951:3041113041113053041194Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein1e-0861.6
NC_014376:317312:3242053242053254671263Clostridium saccharolyticum WM1 chromosome, complete genomemodification methylase1e-0654.7