Pre_GI: BLASTP Hits

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Query: NC_015379:4691868:4711012 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4711012, End: 4711088, Length: 77

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1730534:17355461735546173562277Pseudomonas aeruginosa DK2 chromosome, complete genometRNA-Asp9e-0752.4
NC_015379:4691868:47108454710845471092177Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,tRNA-Asp9e-0752.4
NC_007645:2204066:22157182215718221579477Hahella chejuensis KCTC 2396, complete genometRNA-Asp3e-0650.8
NC_016830:2247789:22523402252340225241374Pseudomonas fluorescens F113 chromosome, complete genometRNA-Asp3e-0650.4
NC_016830:2247789:22521742252174225224774Pseudomonas fluorescens F113 chromosome, complete genometRNA-Asp3e-0650.4
NC_012660:2045398:20504262050426205049974Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Asp3e-0650.4
NC_012660:2045398:20500782050078205015174Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Asp3e-0650.4
NC_009524:1796000:17962891796289179636577Psychrobacter sp. PRwf-1 chromosome, complete genometRNA-Asp5e-0650.1
NC_014910:1591003:15929971592997159307377Alicycliphilus denitrificans BC chromosome, complete genometRNA-Asp7e-0649.3
NC_015422:3413386:34208103420810342088677Alicycliphilus denitrificans K601 chromosome, complete genometRNA-Asp7e-0649.3
NC_008702:1094663:11051241105124110520077Azoarcus sp. BH72, complete genometRNA-Asp7e-0649.3
NC_014910:1591003:15926921592692159276877Alicycliphilus denitrificans BC chromosome, complete genometRNA-Asp7e-0649.3
NC_015422:3513689:35496743549674354975077Alicycliphilus denitrificans K601 chromosome, complete genometRNA-Asp7e-0649.3
NC_014539:1839840:18598111859811185988777Burkholderia sp. CCGE1003 chromosome 1, complete sequencetRNA-Asp7e-0649.3
CP002516:3863932:38824283882428388250477Escherichia coli KO11, complete genometRNA-Asp7e-0649.3
NC_009648:4656187:46685724668572466864877Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometRNA-Asp7e-0649.3
CP002516:3863932:38742043874204387428077Escherichia coli KO11, complete genometRNA-Asp7e-0649.3
CP002185:234719:23762323762323769977Escherichia coli W, complete genometRNA-Asp7e-0649.3
NC_016822:246715:24961924961924969577Shigella sonnei 53G, complete genometRNA-Asp7e-0649.3
NC_016902:3863932:38742043874204387428077Escherichia coli KO11FL chromosome, complete genometRNA-Asp7e-0649.3
NC_016902:3863932:38824283882428388250477Escherichia coli KO11FL chromosome, complete genometRNA-Asp7e-0649.3
NC_008702:1094663:11055081105508110558477Azoarcus sp. BH72, complete genometRNA-Asp7e-0649.3