Pre_GI: BLASTP Hits

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Query: NC_015379:4426827:4443732 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4443732, End: 4444415, Length: 684

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4426827:443682144368214437543723Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, GntR family5e-49194
NC_015733:2581324:261493526149352615648714Pseudomonas putida S16 chromosome, complete genomeGntR family transcriptional regulator2e-25115
NC_014639:1:256072560726266660Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein3e-1892
CP002207:1:256072560726266660Bacillus atrophaeus 1942, complete genomehypothetical protein3e-1892
NC_010511:6169468:619195061919506192657708Methylobacterium sp. 4-46 chromosome, complete genome1e-1789.7
NC_012587:3177583:317681031768103177586777Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, GntR family3e-1685.1
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator1e-1273.6
NC_016514:2079975:207997520799752080661687Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YdfH1e-1273.6
NC_017191:3901914:390191439019143902573660Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator2e-1272.8
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family3e-1272
NC_011283:2836000:291203329120332912719687Klebsiella pneumoniae 342 chromosome, complete genomeGntR family transcriptional regulator4e-1271.6
NC_013850:2846069:287440328744032875089687Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family6e-1270.9
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family6e-1270.9
NC_015724:339500:343813343813344547735Cupriavidus necator N-1 plasmid BB2p, complete sequenceGntR family transcriptional regulator8e-1270.9
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family1e-1170.1
NC_000913:1625500:162637616263761627062687Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator2e-1169.7
CU928160:1625535:164533116453311646017687Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1169.7
NC_010473:1712984:171600117160011716687687Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator2e-1169.7
AC_000091:1627049:163006616300661630752687Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-1169.7
NC_008563:1651270:167156316715631672249687Escherichia coli APEC O1, complete genomehypothetical protein2e-1169.7
CP002185:1727493:174728917472891747975687Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator2e-1169.7
NC_011415:1715644:173544017354401736126687Escherichia coli SE11 chromosome, complete genomeputative transcriptional repressor2e-1169.7
NC_011741:1625535:164533116453311646017687Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1169.7
NC_012759:1517500:151843515184351519121687Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1169.7
NC_012947:2189533:220404922040492204735687Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeGntR family transcriptional regulator2e-1169.7
NC_012967:1593101:159611815961181596804687Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1169.7
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family2e-1169.3
NC_010002:3357752:335915233591523359841690Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family5e-1167.8
NC_008699:1247423:124742312474231248148726Nocardioides sp. JS614, complete genomeGntR domain protein1e-1066.6
NC_015856:268034:267125267125268093969Collimonas fungivorans Ter331 chromosome, complete genomeGntR family transcriptional regulator2e-1066.2
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator2e-1065.9
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator2e-1065.9
NC_014618:2423661:244155524415552442241687Enterobacter cloacae SCF1 chromosome, complete genomeGntR family transcriptional regulator2e-1065.9
NC_017271:4193000:422159942215994222318720Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator MdcY family3e-1065.5
NC_007963:1190847:121570212157021216370669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family3e-1065.1
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator8e-1063.9
NC_020272:20435:418114181142473663Bacillus amyloliquefaciens IT-45, complete genomeputative HTH-type transcriptional regulator YdhC9e-1063.9
NC_014815:4621552:465611546561154656822708Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family1e-0963.2
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein2e-0962.4
NC_015145:92397:917359173592400666Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeGntR family transcriptional regulator2e-0962.4
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family3e-0962
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family3e-0962
NC_013947:1696671:171062117106211711286666Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family4e-0961.6
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator5e-0961.2
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family5e-0961.2
NC_020272:3396800:342166934216693422334666Bacillus amyloliquefaciens IT-45, complete genomeFatty acid metabolism regulator protein8e-0960.8
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family7e-0960.8
NC_009328:1867971:186797118679711868669699Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulatory protein1e-0860.1
NC_013592:3263005:328412532841253284826702Dickeya dadantii Ech586, complete genometranscriptional regulator, GntR family1e-0859.7
NC_016906:3286384:328959032895903290342753Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator2e-0859.7
NC_019791:1272850:130005613000561300721666Caldisphaera lagunensis DSM 15908 chromosome, complete genometranscriptional regulator2e-0859.3
NC_013939:1625491:163812216381221638790669Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator2e-0859.3
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family3e-0858.9
NC_015057:30743:366533665337351699Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencetranscriptional regulator, GntR family3e-0858.9
NC_016582:10015558:100189221001892210019551630Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator3e-0858.5
NC_019940:2931500:295856629585662959279714Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator3e-0858.5
NC_008595:5168941:517071151707115171400690Mycobacterium avium 104, complete genometranscriptional regulator, GntR family protein5e-0858.2
NC_013411:2739989:274439727443972745095699Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family9e-0857.4
NC_020210:1908000:192856519285651929263699Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator9e-0857.4
NC_014915:1880748:188433518843351885033699Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family9e-0857.4
NC_014206:1745203:174693817469381747636699Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator9e-0857.4
NC_013526:65495:890168901689705690Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometranscriptional regulator, GntR family8e-0857.4
NC_008148:1859888:190316519031651903911747Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family8e-0857.4
NC_008380:4078670:408035540803554081065711Rhizobium leguminosarum bv. viciae 3841, complete genomeputative GntR family transcriptional regulator8e-0857.4
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family1e-0757
NC_013740:2218215:222773122277312228360630Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, GntR family1e-0757
NC_006582:4256915:425897342589734259593621Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family1e-0757
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family1e-0757
NC_003911:1791878:184090118409011841641741Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, GntR family9e-0857
NC_011894:5787990:578847757884775789181705Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family1e-0756.6
NC_009720:583060:586317586317586994678Xanthobacter autotrophicus Py2, complete genomeGntR family transcriptional regulator1e-0756.6
NC_008268:3418000:341808234180823418726645Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator, GntR family1e-0756.6
NC_015563:2702787:271975127197512720407657Delftia sp. Cs1-4 chromosome, complete genomeGntR family transcriptional regulator1e-0756.6
NC_012988:4387735:439935343993534400045693Methylobacterium extorquens DM4, complete genomeGntR family transcriptional regulator2e-0756.2
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family2e-0755.8
NC_008596:3404832:342173434217343422429696Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein2e-0755.8
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family2e-0755.8
NC_009439:3770282:380040438004043801204801Pseudomonas mendocina ymp, complete genomeGntR family transcriptional regulator3e-0755.5
NC_008209:1385094:140394714039471404594648Roseobacter denitrificans OCh 114, complete genomeGntR-family transcription regulator, putative4e-0755.1
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator4e-0755.1
NC_018691:761560:778164778164778892729Alcanivorax dieselolei B5 chromosome, complete genomeGntR-family transcriptional regulator5e-0754.7
NC_011991:65368:814228142282090669Agrobacterium vitis S4 plasmid pAtS4b, complete sequencetranscriptional regulatory protein5e-0754.7
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family5e-0754.7
NC_014258:42262:767237672377397675Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator6e-0754.3
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR7e-0754.3
NC_020911:18500:339013390134626726Octadecabacter antarcticus 307, complete genomeputative GntR family transcriptional regulator7e-0754.3
NC_014364:815346:829594829594830268675Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family7e-0754.3
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH1e-0653.9
NC_009648:1956070:197127419712741971990717Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator9e-0753.9
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator9e-0753.9
NC_016147:2964178:297771029777102978438729Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator1e-0653.5
NC_012522:3038890:304323930432393043943705Rhodococcus opacus B4, complete genomeputative GntR family transcriptional regulator1e-0653.5
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator1e-0653.5
NC_016845:2729654:274703827470382747754717Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,GntR family transcriptional regulator1e-0653.5
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family1e-0653.5
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family1e-0653.5
NC_014650:2097900:211502621150262115742717Geobacillus sp. Y4.1MC1 chromosome, complete genomeGntR family transcriptional regulator1e-0653.1
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator1e-0653.1
NC_016642:1913432:193922219392221939881660Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator1e-0653.1
NC_015152:2887414:289483728948372895514678Spirochaeta sp. Buddy chromosome, complete genomeGntR family transcriptional regulator1e-0653.1
NC_012731:2693091:270489427048942705610717Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical transcriptional regulator1e-0653.1
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator1e-0653.1
NC_013850:2624899:262654026265402627256717Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family2e-0652.8
NC_011283:2627050:262869126286912629407717Klebsiella pneumoniae 342 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_015856:3536441:356124535612453561940696Collimonas fungivorans Ter331 chromosome, complete genomeregulatory protein GntR2e-0652.4
NC_004463:1369165:139094013909401391659720Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0652.4
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
NC_013946:2854219:287009028700902870737648Meiothermus ruber DSM 1279 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
NC_010170:1324758:133437413343741335066693Bordetella petrii, complete genomeprobable transcriptional regulator3e-0652
NC_012522:3038890:304554830455483046102555Rhodococcus opacus B4, complete genomehypothetical protein5e-0651.6
NC_015458:3390674:340150434015043402238735Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator6e-0651.2
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family5e-0651.2
NC_002578:1434396:144095614409561441609654Thermoplasma acidophilum DSM 1728, complete genomeNta operon transcriptional regulator related protein5e-0651.2
NC_018644:1263891:127174812717481272407660Alpha proteobacterium HIMB59 chromosome, complete genometranscriptional regulator, gntR family,FCD domain-containing protein7e-0650.8
NC_014831:2082304:210025021002502100963714Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, GntR family7e-0650.8
NC_014119:977136:993862993862994566705Burkholderia sp. CCGE1002 chromosome chromosome 3, completetranscriptional regulator, GntR family8e-0650.8
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator8e-0650.4