Pre_GI: BLASTP Hits

Some Help

Query: NC_015259:673662:704556 Polymorphum gilvum SL003B-26A1 chromosome, complete genome

Start: 704556, End: 706571, Length: 2016

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:485015:5024025024025044262025Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG01113
NC_015259:624979:6392366392366412031968Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor; TraG0789
NC_015259:734795:7358277358277374221596Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG1e-45185
NC_015259:485015:5308405308405323061467Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG2e-45184
NC_015259:673662:6761806761806777571578Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG3e-42173
NC_007797:1451804:1460198146019814624202223Anaplasma phagocytophilum HZ, complete genometype IV secretion system protein VirD49e-29129
NC_012026:1135041:1159067115906711614872421Anaplasma marginale str. Florida, complete genomeVirD4 protein (virD4)1e-28128
NC_004842:1132441:1154957115495711573772421Anaplasma marginale str. St. Maries, complete genomeVirD4 protein1e-28128
NC_013532:85371:8641786417888432427Anaplasma centrale str. Israel, complete genometype IV secretion system protein VirD41e-28128
NC_014100:2782000:2795208279520827971601953Caulobacter segnis ATCC 21756 chromosome, complete genomeTRAG family protein1e-27125
NC_015942:722980:7396097396097418762268Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein8e-28125
NC_005295:21995:3116531165335702406Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirD42e-27124
NC_006831:4500:1217012170145722403Ehrlichia ruminantium str. Gardel, complete genomePutative virD4 protein2e-27124
NC_010338:2443765:2450624245062424523451722Caulobacter sp. K31, complete genomeTRAG family protein3e-27124
NC_012416:4973:83058305103232019Wolbachia sp. wRi, complete genometype IV secretion system protein VirD41e-26122
NC_002978:4973:82698269102151947Wolbachia endosymbiont of Drosophila melanogaster, complete genometype IV secretion system protein VirD42e-26121
NC_014414:2540189:2553515255351525553531839Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein traG3e-26120
NC_009719:1972545:1984249198424919863122064Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer coupling protein TraG4e-26120
NC_007925:3933765:3946807394680739488011995Rhodopseudomonas palustris BisB18, complete genomeTRAG protein2e-25118
NC_015942:1947258:1965686196568619681812496Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein2e-25118
NC_010125:2998619:3001295300129530033162022Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugal transfer protein traG3e-25117
NC_015850:169180:1721031721031744572355Acidithiobacillus caldus SM-1 chromosome, complete genomeTRAG family protein3e-25117
NC_008781:2655071:2665222266522226672071986Polaromonas naphthalenivorans CJ2, complete genomeTRAG family protein3e-25117
NC_007798:652317:6585716585716604961926Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirD46e-25116
NC_003295:2787371:2792029279202927940562028Ralstonia solanacearum GMI1000, complete genomePROBABLE PLASMID CONJUGATION TRAG TRANSMEMBRANE PROTEIN1e-24115
NC_014910:242845:2432882432882452912004Alicycliphilus denitrificans BC chromosome, complete genometrag family protein1e-24115
NC_014910:2930860:2935496293549629375022007Alicycliphilus denitrificans BC chromosome, complete genometrag family protein2e-24115
NC_011365:1135750:1154211115421111561931983Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer coupling protein TraG3e-24114
NC_014834:959986:9681419681419701261986Rhodopseudomonas palustris DX-1 chromosome, complete genomeTRAG family protein3e-24114
NC_009720:4406991:4434900443490044368791980Xanthobacter autotrophicus Py2, complete genomeconjugal transfer coupling protein TraG3e-24114
NC_010170:4800000:4876733487673348787422010Bordetella petrii, complete genomeconjugal transfer protein TraG6e-24113
NC_018691:3082000:3095819309581930978222004Alcanivorax dieselolei B5 chromosome, complete genomeTraG-like protein5e-24113
NC_015259:3902136:3905033390503339071922160Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTraG/TraD family protein5e-24113
NC_015381:2859000:2881633288163328836362004Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugal transfer protein TraG4e-24113
NC_010002:2933909:2969111296911129711202010Delftia acidovorans SPH-1, complete genomeTRAG family protein4e-23110
NC_009445:6621996:6633769663376966353851617Bradyrhizobium sp. ORS 278 chromosome, complete genomeVirD4/TraG family protein3e-23110
NC_009879:835227:8468038468038485781776Rickettsia canadensis str. McKiel, complete genomehypothetical protein3e-23110
NC_016929:825413:8369198369198386941776Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system protein VirB83e-23110
NC_011992:3752867:3757497375749737595002004Acidovorax ebreus TPSY, complete genomeTRAG family protein3e-23110
NC_010943:1332243:1334372133437213363722001Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein2e-22108
NC_004463:18497:3730537305393322028Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein3e-22107
NC_017249:18493:3729937299392811983Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein3e-22107
NC_008577:1489643:1491078149107814930751998Shewanella sp. ANA-3 chromosome 1, complete sequenceTRAG family protein8e-22105
NC_015556:2265940:2270422227042222724131992Pseudomonas fulva 12-X chromosome, complete genomeTRAG family protein9e-22105
NC_011059:670345:6749096749096770952187Prosthecochloris aestuarii DSM 271, complete genome2e-21104
NC_015221:12389:3188831888337321845Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceTRAG family protein4e-21103
NC_016814:18000:3264032640347392100Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceProtein virD43e-20100
NC_011987:53760:5376053760561232364Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequenceTRAG protein7e-1996.3
NC_006371:1743982:1769029176902917708911863Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein TraG3e-1894.4
NC_015385:1875671:1881537188153718836842148Treponema succinifaciens DSM 2489 chromosome, complete genomeTRAG family protein5e-1790.1
NC_003919:3060484:3088230308823030899031674Xanthomonas axonopodis pv. citri str. 306, complete genomeVirD4 protein9e-1789.4
NC_007508:3183631:3196116319611631977891674Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype IV secretion system protein VirD42e-1688.2
NC_013132:7954000:7963702796370279654681767Chitinophaga pinensis DSM 2588, complete genomeTRAG family protein3e-1584
NC_003902:2933121:2952459295245929541321674Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirD4 protein4e-1584
NC_007086:1936505:1956087195608719577601674Xanthomonas campestris pv. campestris str. 8004, complete genomeVirD4 protein4e-1584
NC_015850:1220444:1220444122044412230202577Acidithiobacillus caldus SM-1 chromosome, complete genomeTraG2e-1378.6
NC_003869:1971766:1982399198239919844022004Thermoanaerobacter tengcongensis MB4, complete genomeATPase involved in conjugal plasmid transfer1e-1275.5
NC_013422:1755875:1779991177999117824622472Halothiobacillus neapolitanus c2, complete genomeTRAG family protein5e-1273.6
NC_009437:2815500:2820624282062428225101887Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein2e-1171.6
NC_007643:955362:968844968844969686843Rhodospirillum rubrum ATCC 11170, complete genome3e-1170.9
NC_007643:955362:9676959676959688191125Rhodospirillum rubrum ATCC 11170, complete genome3e-1170.9
NC_012982:711122:7139907139907159751986Hirschia baltica ATCC 49814, complete genomeTRAG family protein4e-1170.5
NC_009720:583060:6035036035036050321530Xanthobacter autotrophicus Py2, complete genomeTRAG family protein5e-1170.1
NC_009437:1556934:1568309156830915701471839Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein7e-1169.7
NC_014816:1592799:1596795159679515984711677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein1e-1068.9
NC_014816:545441:5663965663965680721677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein1e-1068.9
NC_015675:6342164:6345446634544663471911746Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTRAG family protein7e-1066.2
NC_014923:5787493:5790775579077557925201746Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeTRAG family protein7e-1066.2
NC_019973:5716453:5719735571973557214801746Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirD4 component7e-1066.2
NC_009254:365812:3745933745933763111719Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTRAG family protein4e-0963.9
NC_014414:1104386:1109337110933711111751839Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein6e-0963.2
NC_012751:409333:416695416695417393699Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeVirD4 conjugal transfer protein3e-0860.8
NC_010688:1908012:1928821192882119304941674Xanthomonas campestris pv. campestris, complete genometype IV secretion system coupling protein VirD46e-0860.1
NC_017271:149856:1689951689951705751581Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD46e-0860.1
NC_008061:2106848:2109780210978021114531674Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTRAG protein6e-0860.1
NC_010515:1124298:1127230112723011289421713Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceTRAG family protein5e-0860.1
NC_016010:1822212:1863335186333518650321698Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetype IV secretion system protein VirD47e-0859.7
NC_017271:2935643:2973196297319629748631668Xanthomonas campestris pv. raphani 756C chromosome, completeVirD4 protein7e-0859.7
NC_007086:2887875:2924209292420929259061698Xanthomonas campestris pv. campestris str. 8004, complete genomeputative NTPase VagA7e-0859.7
NC_017271:4058642:4069267406926740709701704Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD46e-0859.7
NC_008023:1070986:1082250108225010840431794Streptococcus pyogenes MGAS2096, complete genomeTraG/TraD family3e-0757.8
NC_014721:2201790:2213725221372522156381914Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetrag family protein4e-0757
NC_015437:697051:7214467214467238392394Selenomonas sputigena ATCC 35185 chromosome, complete genomeTRAG family protein5e-0757
NC_011071:2733438:2754506275450627561851680Stenotrophomonas maltophilia R551-3, complete genomeTRAG family protein6e-0756.6
NC_010943:3034366:3052785305278530544641680Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane conjugative DNA transfer protein6e-0756.6
NC_015947:2752450:2772897277289727745761680Burkholderia sp. JV3 chromosome, complete genomeTRAG family protein5e-0756.6
NC_017249:1476500:1492665149266514943411677Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-0756.2
NC_013722:3081459:3101807310180731035011695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein1e-0655.8
NC_013722:2810721:2835935283593528376291695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein1e-0655.5
NC_003902:4111283:412570441257044126417714Xanthomonas campestris pv. campestris str. ATCC 33913, completeNTPase3e-0654.7
NC_014652:379833:3913543913543932311878Caldicellulosiruptor hydrothermalis 108 chromosome, completetrag family protein4e-0653.9